Evidence map›Paper›PMID 36979120›Full record

ArticleBiology2023

Generation of High-Value Genomic Resource in Rice: A "Subgenomic Library" of Low-Light Tolerant Rice Cultivar Swarnaprabha.

Sovanlal Sahu, Payal Gupta, Thirumalanahalli Prakash Gowtham, Kumar Shiva Yogesh, Tenkabailu Dharmanna Sanjay, Ayushi Singh, Hay Van Duong, Sharat Kumar Pradhan, Deepak Singh Bisht, Nagendra Kumar Singh and 3 more

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Article in Biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Drought and Oxidative Stress in Flax (Antioxidants (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sovanlal SahuICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Payal GuptaICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Thirumalanahalli Prakash GowthamICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Kumar Shiva YogeshICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Tenkabailu Dharmanna SanjayICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Ayushi SinghICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Hay Van DuongICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Sharat Kumar PradhanICAR-National Rice Research Institute, Cuttack 753006, India.ORCID 0000-0001-7716-0721
Deepak Singh BishtICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Nagendra Kumar SinghICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.ORCID 0000-0002-7753-8517
Mirza J BaigICAR-National Rice Research Institute, Cuttack 753006, India.
Rhitu RaiICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.
Prasanta K DashICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi 110001, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice is the major staple food crop for more than 50% of the world's total population, and its production is of immense importance for global food security. As a photophilic plant, its yield is governed by the quality and duration of light. Like all photosynthesizing plants, rice perceives the changes in the intensity of environmental light using phytochromes as photoreceptors, and it initiates a morphological response that is termed as the shade-avoidance response (SAR). Phytochromes (PHYs) are the most important photoreceptor family, and they are primarily responsible for the absorption of the red (R) and far-red (FR) spectra of light. In our endeavor, we identified the morphological differences between two contrasting cultivars of rice: IR-64 (low-light susceptible) and Swarnaprabha (low-light tolerant), and we observed the phenological differences in their growth in response to the reduced light conditions. In order to create genomic resources for low-light tolerant rice, we constructed a subgenomic library of Swarnaprabha that expedited our efforts to isolate light-responsive photoreceptors. The titer of the library was found to be 3.22 × 10

Indexed as

far-red lightGramineaelight-responsive genesphotoreceptorsphytochromesrice

Identifiers

PMID36979120
PMCPMC10044706

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.