Evidence map›Paper›PMID 36977915›Full record

ArticleFunctional & integrative genomics2023

Systematic pan-cancer analysis identifies transmembrane protein 158 as a potential therapeutic, prognostic and immunological biomarker.

Jiayi Li, Haiguang Hou, Jinhao Sun, Zhaoxi Ding, Yingkun Xu, Guibao Li

RetractedAbstract readRetracted Publication
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Jiayi LiSchool of Management, Shandong University, Jinan, 250100, Shandong, China.
Haiguang HouDepartment of Anatomy, School of Basic Medical Sciences, Shandong University, Jinan, 250012, Shandong, China.
Jinhao SunDepartment of Anatomy, School of Basic Medical Sciences, Shandong University, Jinan, 250012, Shandong, China.
Zhaoxi DingDepartment of Anatomy, School of Basic Medical Sciences, Shandong University, Jinan, 250012, Shandong, China.
Yingkun XuDepartment of Breast and Thyroid Surgery, The First Affiliated Hospital of Chongqing Medical University, Chongqing, 400016, China.
Guibao LiDepartment of Anatomy, School of Basic Medical Sciences, Shandong University, Jinan, 250012, Shandong, China. liguibao@sdu.edu.cn.
Shandong University · CNChongqing Medical University · CN

Funding

Science and Technology Development Plan of Shandong Province 2016GSF201054
6 · The paper itself

Abstract

The purpose of this study was to investigate the expression significance, predictive value, immunologic function, and biological role of transmembrane protein 158 (TMEM158) in the development of pan-cancer. To achieve this, we utilized data from multiple databases, including TCGA, GTEx, GEPIA, and TIMER, to collect gene transcriptome, patient prognosis, and tumor immune data. We evaluated the association of TMEM158 with patient prognosis, tumor mutational burden (TMB), and microsatellite instability (MSI) in pan-cancer samples. We performed immune checkpoint gene co-expression analysis and gene set enrichment analysis (GSEA) to better understand the immunologic function of TMEM158. Our findings revealed that TMEM158 was significantly differentially expressed between most types of cancer tissues and their adjacent normal tissues and was associated with prognosis. Moreover, TMEM158 was significantly correlated with TMB, MSI, and tumor immune cell infiltration in multiple cancers. Co-expression analysis of immune checkpoint genes showed that TMEM158 was related to the expression of several common immune checkpoint genes, especially CTLA4 and LAG3. Gene enrichment analysis further revealed that TMEM158 was involved in multiple immune-related biological pathways in pan-cancer. Overall, this systematic pan-cancer analysis suggests that TMEM158 is generally highly expressed in various cancer tissues and is closely related to patient prognosis and survival across multiple cancer types. TMEM158 may serve as a significant predictor of cancer prognosis and modulate immune responses to various types of cancer.

Indexed as

NeoplasmsBiomarkersGene Expression ProfilingHumansMembrane ProteinsPrognosisTumor Suppressor ProteinsBiomarkersMembrane ProteinsTMEM158 protein, humanTumor Suppressor ProteinsImmune infiltrationPan-cancer analysisTCGATherapeutic targetTMEM158

Identifiers

PMID36977915
OpenAlexW4361213552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.