Evidence map›Paper›PMID 36976799›Full record

ArticlePLoS genetics2023

Zyxin contributes to coupling between cell junctions and contractile actomyosin networks during apical constriction.

Mark M Slabodnick, Sophia C Tintori, Mangal Prakash, Pu Zhang, Christopher D Higgins, Alicia H Chen, Timothy D Cupp, Terrence Wong, Emily Bowie, Florian Jug and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Mark M SlabodnickBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.ORCID 0000-0003-0324-1662
Sophia C TintoriBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Mangal PrakashMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
Pu ZhangBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.ORCID 0000-0003-4174-8202
Christopher D HigginsBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Alicia H ChenBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Timothy D CuppBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Terrence WongBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Emily BowieBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.
Florian JugMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
Bob GoldsteinBiology Department, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.ORCID 0000-0001-6961-675X
University of North Carolina at Chapel Hill · USHuman Technopole · ITMax Planck Institute of Molecular Cell Biology and Genetics · DE

Funding

C. elegans Gastrulation: a Model for Understanding Apical Constriction MechanismsR35GM134838 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT P GOLDSTEIN · 2020 to 2026
$2.9M
Identifying regulators of morphogenesis with a transcriptional lineage of C. elegans developmentF31HD088128 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TINTORI, SOPHIA · 2016 to 2017
$68k
NICHD NIH HHS F31 HD088128NIGMS NIH HHS R35 GM134838
6 · The paper itself

Abstract

One of the most common cell shape changes driving morphogenesis in diverse animals is the constriction of the apical cell surface. Apical constriction depends on contraction of an actomyosin network in the apical cell cortex, but such actomyosin networks have been shown to undergo continual, conveyor belt-like contractions before the shrinking of an apical surface begins. This finding suggests that apical constriction is not necessarily triggered by the contraction of actomyosin networks, but rather can be triggered by unidentified, temporally-regulated mechanical links between actomyosin and junctions. Here, we used C. elegans gastrulation as a model to seek genes that contribute to such dynamic linkage. We found that α-catenin and β-catenin initially failed to move centripetally with contracting cortical actomyosin networks, suggesting that linkage is regulated between intact cadherin-catenin complexes and actomyosin. We used proteomic and transcriptomic approaches to identify new players, including the candidate linkers AFD-1/afadin and ZYX-1/zyxin, as contributing to C. elegans gastrulation. We found that ZYX-1/zyxin is among a family of LIM domain proteins that have transcripts that become enriched in multiple cells just before they undergo apical constriction. We developed a semi-automated image analysis tool and used it to find that ZYX-1/zyxin contributes to cell-cell junctions' centripetal movement in concert with contracting actomyosin networks. These results identify several new genes that contribute to C. elegans gastrulation, and they identify zyxin as a key protein important for actomyosin networks to effectively pull cell-cell junctions inward during apical constriction. The transcriptional upregulation of ZYX-1/zyxin in specific cells in C. elegans points to one way that developmental patterning spatiotemporally regulates cell biological mechanisms in vivo. Because zyxin and related proteins contribute to membrane-cytoskeleton linkage in other systems, we anticipate that its roles in regulating apical constriction in this manner may be conserved.

Indexed as

ActomyosinCaenorhabditis elegansAnimalsConstrictionIntercellular JunctionsMorphogenesisProteomicsZyxinActomyosinZyxin

Identifiers

PMID36976799
PMCPMC10081768
OpenAlexW4361190456

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.