Evidence map›Paper›PMID 36976651›Full record

Observational studyThe Journal of clinical investigation2023

Pharmacologic improvement of CFTR function rapidly decreases sputum pathogen density, but lung infections generally persist.

David P Nichols, Sarah J Morgan, Michelle Skalland, Anh T Vo, Jill M Van Dalfsen, Sachinkumar Bp Singh, Wendy Ni, Lucas R Hoffman, Kailee McGeer, Sonya L Heltshe and 5 more

Registry-linked trialOpen access · goldAbstract readObservational StudyMulticenter Study
In one paragraph

Observational study in The Journal of clinical investigation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04038047 (A Prospective Study to Evaluate Biological and Clinical Effects of Significantly Corrected CFTR Function), which is not on this map. Cited by 145 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed, 1 pooled it
49.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04038047 completednot on this map

A Prospective Study to Evaluate Biological and Clinical Effects of Significantly Corrected CFTR Function (The PROMISE Study)

TypeobservationalSponsorNicole HamblettRan2019 to 2024Enrolled490ConditionsCystic Fibrosis
3 · Its place in the literature

Who cites it

145 citing papers in PubMed, 1 synthesis or guideline pooled it, 190 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Efficacy and safety of LAU-7b in a Phase 2 trial in adults with cystic fibrosis.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2025
    Trial
  4. How cystic fibrosis modulator therapy could transformMicrobiology (Reading, England) · 2026
    Review
  5. Review
  6. Bridging bench and bedside: translational omics ofEuropean respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  7. Review
  8. HDAC6 inhibition reducesInfection and immunity · 2026
    Article
  9. Article
  10. Article
  11. Infection and immunity · 2026
    Article
  12. Establishment of a chinchilla model ofMicrobiology spectrum · 2026
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

David P NicholsDepartment of Pediatrics and.
Sarah J MorganDepartments of Microbiology and Medicine, University of Washington, Seattle, Washington, USA.
Michelle SkallandTherapeutics Development Network Coordinating Center, Seattle Children's Research Institute, Seattle, Washington, USA.
Anh T VoDepartments of Microbiology and Medicine, University of Washington, Seattle, Washington, USA.
Jill M Van DalfsenTherapeutics Development Network Coordinating Center, Seattle Children's Research Institute, Seattle, Washington, USA.
Sachinkumar Bp SinghDepartment of Medicine, University of Iowa, Iowa City, Iowa, USA.
Wendy NiDepartments of Microbiology and Medicine, University of Washington, Seattle, Washington, USA.
Lucas R HoffmanDepartment of Pediatrics and.
Kailee McGeerDepartments of Microbiology and Medicine, University of Washington, Seattle, Washington, USA.
Sonya L HeltsheDepartment of Pediatrics and.
John P ClancyDepartment of Medicine, University of Alabama, Birmingham, Alabama, USA.
Steven M RoweDepartment of Medicine, University of Alabama, Birmingham, Alabama, USA.
Peter JorthDepartments of Pathology and Laboratory Medicine, Medicine, and Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California, USA.
Pradeep K SinghDepartments of Microbiology and Medicine, University of Washington, Seattle, Washington, USA.
PROMISE-Micro Study Group
University of Washington · USCystic Fibrosis Foundation · USSeattle Children's Hospital · USCedars-Sinai Medical Center · USUniversity of Iowa · US

Funding

UAB CF Research and Translation Core CenterP30DK072482 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Brian R. Davis · 2007 to 2026
$23.0M
Translational Research Center to Expedite Novel Therapies in Cystic FibrosisP30DK089507 · NIDDK · SEATTLE CHILDREN'S HOSPITAL · PI Christopher Hooper Goss · 2010 to 2026
$21.4M
Field Study to Understand Progression of Chronic Airway InfectionR01HL148274 · NHLBI · UNIVERSITY OF WASHINGTON · PI EMOND, MARY J, SINGH, PRADEEP K · 2019 to 2022
$2.9M
NHLBI NIH HHS R01 HL148274NIDDK NIH HHS P30 DK072482NIDDK NIH HHS P30 DK089507
6 · The paper itself

Abstract

BackgroundLung infections are among the most consequential manifestations of cystic fibrosis (CF) and are associated with reduced lung function and shortened survival. Drugs called CF transmembrane conductance regulator (CFTR) modulators improve activity of dysfunctional CFTR channels, which is the physiological defect causing CF. However, it is unclear how improved CFTR activity affects CF lung infections.MethodsWe performed a prospective, multicenter, observational study to measure the effect of the newest and most effective CFTR modulator, elexacaftor/tezacaftor/ivacaftor (ETI), on CF lung infections. We studied sputum from 236 people with CF during their first 6 months of ETI using bacterial cultures, PCR, and sequencing.ResultsMean sputum densities of Staphylococcus aureus, Pseudomonas aeruginosa, Stenotrophomonas maltophilia, Achromobacter spp., and Burkholderia spp. decreased by 2-3 log10 CFU/mL after 1 month of ETI. However, most participants remained culture positive for the pathogens cultured from their sputum before starting ETI. In those becoming culture negative after ETI, the pathogens present before treatment were often still detectable by PCR months after sputum converted to culture negative. Sequence-based analyses confirmed large reductions in CF pathogen genera, but other bacteria detected in sputum were largely unchanged. ETI treatment increased average sputum bacterial diversity and produced consistent shifts in sputum bacterial composition. However, these changes were caused by ETI-mediated decreases in CF pathogen abundance rather than changes in other bacteria.ConclusionsTreatment with the most effective CFTR modulator currently available produced large and rapid reductions in traditional CF pathogens in sputum, but most participants remain infected with the pathogens present before modulator treatment.Trial RegistrationClinicalTrials.gov NCT04038047.FundingThe Cystic Fibrosis Foundation and the NIH.

Indexed as

Cystic FibrosisPneumoniaBacteriaBenzodioxolesCystic Fibrosis Transmembrane Conductance RegulatorHumansLungMutationProspective StudiesSputumBenzodioxolesCFTR protein, humanCystic Fibrosis Transmembrane Conductance RegulatorBacterial infectionsMicrobiologyPulmonology

Identifiers

PMID36976651
PMCPMC10178839
OpenAlexW4361190268

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.