Evidence map›Paper›PMID 36976164›Full record

ArticleThe Journal of experimental medicine2023

The interweaved signatures of common-gamma-chain cytokines across immunologic lineages.

Alev Baysoy, Kumba Seddu, Tamara Salloum, Caleb A Dawson, Juliana J Lee, Liang Yang, Shani Gal-Oz, Hadas Ner-Gaon, Julie Tellier, Alberto Millan and 8 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  4. Review
  5. Dynamics and variegation in the Treg response to Interleukin-2.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  11. Regulatory T cell-derived enkephalin gates nociception.bioRxiv : the preprint server for biology · 2024
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 3 countries.

Alev Baysoy *Department of Immunology, Harvard Medical School , Boston, MA, USA.ORCID 0000-0001-5526-5848
Kumba Seddu *Department of Immunology, Harvard Medical School , Boston, MA, USA.ORCID 0000-0002-0875-5833
Tamara SalloumDivision of Allergy and Clinical Immunology, Brigham and Women's Hospital; and Department of Medicine, Harvard Medical School , Boston, MA, USA.ORCID 0000-0002-2689-4175
Caleb A DawsonThe Walter and Eliza Hall Institute of Medical Research and Department of Medical Biology, University of Melbourne , Parkville, Australia.ORCID 0000-0002-6835-6930
Juliana J LeeDepartment of Immunology, Harvard Medical School , Boston, MA, USA.ORCID 0000-0002-7393-9997
Liang YangDepartment of Immunology, Harvard Medical School , Boston, MA, USA.ORCID 0009-0007-2903-641X
Shani Gal-OzDepartment of Life Sciences, Ben-Gurion University of the Negev , Beer-Sheva, Israel.ORCID 0000-0001-7775-2006
Hadas Ner-GaonDepartment of Life Sciences, Ben-Gurion University of the Negev , Beer-Sheva, Israel.ORCID 0000-0002-6288-5065
Julie TellierThe Walter and Eliza Hall Institute of Medical Research and Department of Medical Biology, University of Melbourne , Parkville, Australia.ORCID 0000-0003-2787-8174
Alberto MillanDepartment of Microbiology and Immunology, University of California, San Francisco , San Francisco, CA, USA.ORCID 0000-0003-1186-7219
Alexander SassePaul G. Allen School of Computer Science and Engineering, University of Washington , Seattle, WA, USA.ORCID 0000-0001-7031-8848
Brian BrownPrecision Immunology Institute, Icahn School of Medicine at Mount Sinai , New York, NY, USA.ORCID 0000-0002-3670-8778
Lewis L LanierDepartment of Microbiology and Immunology, University of California, San Francisco , San Francisco, CA, USA.ORCID 0000-0003-1308-3952
Tal ShayDepartment of Life Sciences, Ben-Gurion University of the Negev , Beer-Sheva, Israel.ORCID 0000-0003-0755-1350
Stephen NuttThe Walter and Eliza Hall Institute of Medical Research and Department of Medical Biology, University of Melbourne , Parkville, Australia.ORCID 0000-0002-0020-6637
Daniel DwyerDivision of Allergy and Clinical Immunology, Brigham and Women's Hospital; and Department of Medicine, Harvard Medical School , Boston, MA, USA.ORCID 0000-0001-5029-261X
Christophe BenoistDepartment of Immunology, Harvard Medical School , Boston, MA, USA.ORCID 0000-0003-1172-6555
Immunological Genome Project Consortium
Ben-Gurion University of the Negev · ILHarvard University · USThe University of Melbourne · AUBrigham and Women's Hospital · USBroad Institute · USUniversity of California, San Francisco · USIcahn School of Medicine at Mount Sinai · USUniversity of Washington · US

Funding

ImmGen: Gene Expression and Regulation in Immune CellsR24AI072073 · NIAID · JOSLIN DIABETES CENTER · PI CHRISTOPHE O. BENOIST · 2007 to 2026
$28.5M
MOLECULAR AND CELLULAR IMMUNOLOGYT32AI007334 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CYSTER, JASON G · 1988 to 2023
$11.0M
NIAID NIH HHS R24 AI072073NIAID NIH HHS T32 AI007334
6 · The paper itself

Abstract

"γc" cytokines are a family whose receptors share a "common-gamma-chain" signaling moiety, and play central roles in differentiation, homeostasis, and communications of all immunocyte lineages. As a resource to better understand their range and specificity of action, we profiled by RNAseq the immediate-early responses to the main γc cytokines across all immunocyte lineages. The results reveal an unprecedented landscape: broader, with extensive overlap between cytokines (one cytokine doing in one cell what another does elsewhere) and essentially no effects unique to any one cytokine. Responses include a major downregulation component and a broad Myc-controlled resetting of biosynthetic and metabolic pathways. Various mechanisms appear involved: fast transcriptional activation, chromatin remodeling, and mRNA destabilization. Other surprises were uncovered: IL2 effects in mast cells, shifts between follicular and marginal zone B cells, paradoxical and cell-specific cross-talk between interferon and γc signatures, or an NKT-like program induced by IL21 in CD8+ T cells.

Indexed as

CD8-Positive T-LymphocytesCytokinesCell DifferentiationSignal TransductionCytokines

Identifiers

PMID36976164
PMCPMC10067526
OpenAlexW4361218250

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.