Evidence map›Paper›PMID 36975430›Full record

ArticleCurrent oncology (Toronto, Ont.)2023

Molecular Characterization and Prognosis of Lactate-Related Genes in Lung Adenocarcinoma.

Zixin Guo, Liwen Hu, Qingwen Wang, Yujin Wang, Xiao-Ping Liu, Chen Chen, Sheng Li, Weidong Hu

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Article in Current oncology (Toronto, Ont.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zixin GuoDepartment of Thoracic Surgery, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.ORCID 0000-0002-8005-2630
Liwen HuDepartment of Thoracic Surgery, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.
Qingwen WangDepartment of Thoracic Surgery, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.
Yujin WangDepartment of Thoracic Surgery, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.ORCID 0000-0001-9862-0512
Xiao-Ping LiuDepartment of Urology, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.
Chen ChenDepartment of Biological Repositories, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.
Sheng LiDepartment of Biological Repositories, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.ORCID 0000-0003-4070-7345
Weidong HuDepartment of Thoracic Surgery, Zhongnan Hospital of Wuhan University, Wuhan 430071, China.ORCID 0000-0003-3646-8572

Funding

Zhongnan Hospital of Wuhan University Science, Technology and Innovation Seed Fund CXPY2019088Zhongnan Hospital of Wuhan University Science, Technology and Innovation Seed Fund LCYF202208
6 · The paper itself

Abstract

objectiveTo explore the lactate-related genes (LRGs) in lung adenocarcinoma (LUAD) by various methods, construct a prognostic model, and explore the relationship between lactate subtypes and the immune tumor microenvironment (TME).

methods24 LRGs were collected. The mutation landscape and the prognosis value of LRGs were explored by using The Cancer Genome Atlas (TCGA) data. Consensus clustering analysis was used for different lactate subtype identification. Based on the lactate subtypes, we explore the landscape of TME cell infiltration. A risk-score was calculated by using the LASSO-Cox analysis. A quantitative real-time PCR assay was utilized to validate the expression of characteristic genes in clinical cancer tissues and paracarinoma tissues from LUAD patients.

resultsComparing the normal samples, 18 LRGs were differentially expressed in tumor samples, which revealed that the differential expression of LRGs may be related to Copy Number Variation (CNV) alterations. The two distinct lactate subtypes were defined. Compared to patients in the LRGcluster A group, LUAD patients in the LRGcluster B group achieved better survival. The prognostic model was constructed based on differentially expressed genes (DEGs) via the LASSO-Cox analysis, which showed the accuracy of predicting the prognosis of LUAD patients using the ROC curve. A high-risk score was related to a high immune score, stromal score, and tumor mutation burden (TMB). Patients had better OS with low risk compared with those with high risk. The sensitivities of different risk groups to chemotherapeutic drugs were explored. Finally, the expression of characteristic genes in clinical cancer tissues and paracarinoma tissues from LUAD patients was verified via qRT-PCR.

conclusionsThe lactate subtypes were independent prognostic biomarkers in LUAD. Additionally, the difference in the lactate subtypes was an indispensable feature for the individual TME. The comprehensive evaluation of the lactate subtypes in the single tumor would help us to understand the infiltration characteristics of TME and guide immunotherapy strategies.

Indexed as

Adenocarcinoma of LungLung NeoplasmsDNA Copy Number VariationsHumansLactic AcidPrognosisTumor MicroenvironmentLactic Acidimmune infiltrationlactatelung adenocarcinomaprognosistumor microenvironment

Identifiers

PMID36975430
PMCPMC10047707

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