Evidence map›Paper›PMID 36975205›Full record

ArticleeLife2023

Longitudinal fundus imaging and its genome-wide association analysis provide evidence for a human retinal aging clock.

Sara Ahadi, Kenneth A Wilson, Boris Babenko, Cory Y McLean, Drew Bryant, Orion Pritchard, Ajay Kumar, Enrique M Carrera, Ricardo Lamy, Jay M Stewart and 4 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
13.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Sara AhadiGoogle Research, Mountain View, United States.ORCID 0000-0002-7849-2135
Kenneth A Wilson *Buck Institute for Research on Aging, Novato, United States.ORCID 0000-0003-3227-9977
Boris Babenko *Google Health, Palo Alto, United States.
Cory Y McLean *Google Health, Cambridge, United States.ORCID 0000-0001-9928-8216
Drew BryantGoogle Research, Mountain View, United States.
Orion PritchardGoogle Research, Mountain View, United States.
Ajay KumarDepartment of Biophysics, Post Graduate Institute of Medical Education and Research, Chandigarh, India.
Enrique M CarreraBuck Institute for Research on Aging, Novato, United States.
Ricardo LamyDepartment of Ophthalmology, Zuckerberg San Francisco General Hospital and Trauma Center, San Francisco, United States.
Jay M StewartDepartment of Ophthalmology, University of California, San Francisco, San Francisco, United States.
Avinash VaradarajanGoogle Health, Palo Alto, United States.
Marc BerndlGoogle Research, Mountain View, United States.
Pankaj Kapahi *Buck Institute for Research on Aging, Novato, United States.ORCID 0000-0002-5629-4947
Ali Bashir *Google Research, Mountain View, United States.
Google (United States) · USBuck Institute for Research on Aging · USPost Graduate Institute of Medical Education and Research · INSan Francisco General Hospital · USUniversity of California, San Francisco · US

Funding

Training in Basic Research on Aging and Age-Related DiseaseT32AG000266 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Lisa M Ellerby · 1998 to 2026
$13.8M
Molecular Mechanisms of Lifespan Extension by Dietary Restriction in DrosophilaR01AG038688 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2011 to 2015
$2.3M
Role of Circadian Clocks in Aging using DrosophilaR01AG045835 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI KAPAHI, PANKAJ · 2013 to 2017
$2.1M
Determining the role of OXR1 in aging and Alzheimer's diseaseR56AG070705 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI ELLERBY, LISA M, KAPAHI, PANKAJ · 2021 to 2021
$851k
NIA NIH HHS R01 AG038688NIA NIH HHS R01 AG045835NIA NIH HHS T32 AG000266
6 · The paper itself

Abstract

Biological age, distinct from an individual's chronological age, has been studied extensively through predictive aging clocks. However, these clocks have limited accuracy in short time-scales. Here we trained deep learning models on fundus images from the EyePACS dataset to predict individuals' chronological age. Our retinal aging clocking, 'eyeAge', predicted chronological age more accurately than other aging clocks (mean absolute error of 2.86 and 3.30 years on quality-filtered data from EyePACS and UK Biobank, respectively). Additionally, eyeAge was independent of blood marker-based measures of biological age, maintaining an all-cause mortality hazard ratio of 1.026 even when adjusted for phenotypic age. The individual-specific nature of eyeAge was reinforced via multiple GWAS hits in the UK Biobank cohort. The top GWAS locus was further validated via knockdown of the fly homolog,

Indexed as

AgingGenome-Wide Association StudyChild, PreschoolDiagnostic ImagingEpigenesis, GeneticFundus OculiHumansRetinaaging clockbiological agecomputational biologydeep learningD. melanogasterfundus imaginghumanlongitudinal samplingsystems biology

Identifiers

PMID36975205
PMCPMC10110236
OpenAlexW4361190285

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.