Evidence map›Paper›PMID 36974664›Full record

ArticleOpen biology2023

Spatial transcriptomes and microbiota reveal immune mechanism that respond to pathogen infection in the posterior intestine of

Min Cao, Ting Xue, Huijun Huo, Xiaoyan Zhang, Ning Ning Wang, Xu Yan, Chao Li

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Open biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Min CaoSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.
Ting XueSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.
Huijun HuoSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.
Xiaoyan ZhangSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.
Ning Ning WangSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.
Xu YanSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.
Chao LiSchool of Marine Science and Engineering, Qingdao Agricultural University, Qingdao 266109, People's Republic of China.ORCID 0000-0002-1950-0190
Qingdao Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The intestine is a site of immune cell priming at birth. Therefore, spatial transcriptomes were performed to define how the transcriptomic landscape was spatially organized in the posterior intestine of

Indexed as

MicrobiotaPerciformesAnimalsGene Expression ProfilingIntestinesTranscriptomeEdwardsiella piscicidamicrobiota compositionposterior intestineSebastes schlegeliispatial transcriptome

Identifiers

PMID36974664
PMCPMC9944294
OpenAlexW4321503788

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.