Evidence map›Paper›PMID 36973261›Full record

ArticleNature communications2023

Single cell analysis in head and neck cancer reveals potential immune evasion mechanisms during early metastasis.

Hong Sheng Quah, Elaine Yiqun Cao, Lisda Suteja, Constance H Li, Hui Sun Leong, Fui Teen Chong, Shilpi Gupta, Camille Arcinas, John F Ouyang, Vivian Ang and 9 more

Open access · goldFull text read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
19.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 124 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 3 countries.

Hong Sheng Quah *Cancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.ORCID 0000-0001-8430-8528
Elaine Yiqun Cao *Program in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School, Singapore, Singapore.
Lisda SutejaCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.
Constance H LiCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.
Hui Sun LeongCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.
Fui Teen ChongCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.
Shilpi GuptaSingapore Immunology Network (SIgN), Agency for Science Technology and Research (A*STAR), Singapore, Singapore.
Camille ArcinasCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.ORCID 0000-0001-5374-9232
John F OuyangProgram in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School, Singapore, Singapore.ORCID 0000-0002-1239-1577
Vivian AngSingapore Immunology Network (SIgN), Agency for Science Technology and Research (A*STAR), Singapore, Singapore.
Teja CelharHuNIT platform, Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.ORCID 0000-0003-1384-0941
Yunqian ZhaoHuNIT platform, Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Hui Chen TayHuNIT platform, Singapore Immunology Network (SIgN), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Jerry ChanDepartment of Reproductive Medicine, KK Women's and Children's Hospital, Singapore, Singapore.
Takeshi TakahashiLaboratory Animal Research Department, Central Institute for Experimental Animals (CIEA), Kawasaki, Japan.
Daniel S W TanCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore.ORCID 0000-0002-6514-6786
Subhra K BiswasSingapore Immunology Network (SIgN), Agency for Science Technology and Research (A*STAR), Singapore, Singapore.
Owen J L RackhamProgram in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School, Singapore, Singapore.ORCID 0000-0002-4390-0872
N Gopalakrishna IyerCancer Therapeutics Research Laboratory, National Cancer Centre, Singapore, Singapore. gmsngi@nus.edu.sg.ORCID 0000-0002-8812-6219
Duke-NUS Medical School · SGAgency for Science, Technology and Research · SGNational Cancer Centre Singapore · SGBritish Library · GBCentral Institute for Experimental Animals · JPKK Women's and Children's Hospital · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Profiling tumors at single-cell resolution provides an opportunity to understand complexities underpinning lymph-node metastases in head and neck squamous-cell carcinoma. Single-cell RNAseq (scRNAseq) analysis of cancer-cell trajectories identifies a subpopulation of pre-metastatic cells, driven by actionable pathways including AXL and AURK. Blocking these two proteins blunts tumor invasion in patient-derived cultures. Furthermore, scRNAseq analyses of tumor-infiltrating CD8 + T-lymphocytes show two distinct trajectories to T-cell dysfunction, corroborated by their clonal architecture based on single-cell T-cell receptor sequencing. By determining key modulators of these trajectories, followed by validation using external datasets and functional experiments, we uncover a role for SOX4 in mediating T-cell exhaustion. Finally, interactome analyses between pre-metastatic tumor cells and CD8 + T-lymphocytes uncover a putative role for the Midkine pathway in immune-modulation and this is confirmed by scRNAseq of tumors from humanized mice. Aside from specific findings, this study demonstrates the importance of tumor heterogeneity analyses in identifying key vulnerabilities during early metastasis.

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsAnimalsCD8-Positive T-LymphocytesImmune EvasionLymphocytes, Tumor-InfiltratingMiceSquamous Cell Carcinoma of Head and Neck

Identifiers

PMID36973261
PMCPMC10042873
OpenAlexW4361007118

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read64
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.