Evidence map›Paper›PMID 36971347›Full record

ArticleeLife2023

Histone deacetylase 1 maintains lineage integrity through histone acetylome refinement during early embryogenesis.

Jeff Jiajing Zhou, Jin Sun Cho, Han Han, Ira L Blitz, Wenqi Wang, Ken W Y Cho

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Foxh1 is a locus-specific PRC2 recruiter governing germ layer silencing.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Acute chromatin decompaction stiffens the nucleus as revealed by nanopillar-induced nuclear deformation in cells.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Epigenomic dynamics of early Xenopus Embryos.Development, growth & differentiation · 2022
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jeff Jiajing ZhouDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, United States.
Jin Sun ChoDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, United States.
Han HanDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, United States.
Ira L BlitzDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, United States.
Wenqi WangDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, United States.ORCID 0000-0003-4053-5088
Ken W Y ChoDepartment of Developmental and Cell Biology, University of California, Irvine, Irvine, United States.ORCID 0000-0001-7282-1770
University of California, Irvine · US

Funding

Regulation and function of the Hippo pathway in growth controlR01GM126048 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Wenqi Wang · 2018 to 2026
$3.0M
Zygotic Genome Activation by Maternal Transcription Factors and Epigenetic ModifiersR35GM139617 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Ken W.Y. Cho · 2021 to 2026
$2.6M
Mechanisms of Foxh1 pioneer factor action during mesendoderm developmentR01GM126395 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI CHO, KEN W.Y. · 2017 to 2020
$1.6M
NIGMS NIH HHS R01 GM126048NIGMS NIH HHS R01GM126048NIGMS NIH HHS R01 GM126395NIGMS NIH HHS R01GM126395NIGMS NIH HHS R35 GM139617NIGMS NIH HHS R35GM139617
6 · The paper itself

Abstract

Histone acetylation is a pivotal epigenetic modification that controls chromatin structure and regulates gene expression. It plays an essential role in modulating zygotic transcription and cell lineage specification of developing embryos. While the outcomes of many inductive signals have been described to require enzymatic activities of histone acetyltransferases and deacetylases (HDACs), the mechanisms by which HDACs confine the utilization of the zygotic genome remain to be elucidated. Here, we show that histone deacetylase 1 (Hdac1) progressively binds to the zygotic genome from mid-blastula and onward. The recruitment of Hdac1 to the genome at blastula is instructed maternally.

Indexed as

Histone Deacetylase 1HistonesAcetylationBlastocystChromatinEmbryonic DevelopmentHistone Deacetylase 2Histone DeacetylasesChromatinHistone Deacetylase 1Histone Deacetylase 2Histone DeacetylasesHistonesdevelopmental biologyepigeneticsgerm layerHdac1histone acetylationxenopusXenopuszygotic genome activation

Identifiers

PMID36971347
PMCPMC10079291
OpenAlexW4361003736

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.