Evidence map›Paper›PMID 36970670›Full record

ArticleFrontiers in microbiology2023

An untargeted exometabolomics approach to characterize dissolved organic matter in groundwater of the Samail Ophiolite.

Lauren M Seyler, Emily A Kraus, Craig McLean, John R Spear, Alexis S Templeton, Matthew O Schrenk

Open access · goldFull text read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Lauren M SeylerDepartment of Earth and Environmental Sciences, Michigan State University, East Lansing, MI, United States.
Emily A KrausDepartment of Civil and Environmental Engineering, Colorado School of Mines, Golden, CO, United States.
Craig McLeanMassachusetts Institute of Technology, Cambridge, MA, United States.
John R SpearDepartment of Civil and Environmental Engineering, Colorado School of Mines, Golden, CO, United States.
Alexis S TempletonDepartment of Geological Sciences, University of Colorado, Boulder, Boulder, CO, United States.
Matthew O SchrenkDepartment of Earth and Environmental Sciences, Michigan State University, East Lansing, MI, United States.
University of Colorado Boulder · USBlue Marble Space Institute of Science · USColorado School of Mines · USMassachusetts Institute of Technology · USMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The process of serpentinization supports life on Earth and gives rise to the habitability of other worlds in our Solar System. While numerous studies have provided clues to the survival strategies of microbial communities in serpentinizing environments on the modern Earth, characterizing microbial activity in such environments remains challenging due to low biomass and extreme conditions. Here, we used an untargeted metabolomics approach to characterize dissolved organic matter in groundwater in the Samail Ophiolite, the largest and best characterized example of actively serpentinizing uplifted ocean crust and mantle. We found that dissolved organic matter composition is strongly correlated with both fluid type and microbial community composition, and that the fluids that were most influenced by serpentinization contained the greatest number of unique compounds, none of which could be identified using the current metabolite databases. Using metabolomics in conjunction with metagenomic data, we detected numerous products and intermediates of microbial metabolic processes and identified potential biosignatures of microbial activity, including pigments, porphyrins, quinones, fatty acids, and metabolites involved in methanogenesis. Metabolomics techniques like the ones used in this study may be used to further our understanding of life in serpentinizing environments, and aid in the identification of biosignatures that can be used to search for life in serpentinizing systems on other worlds.

Indexed as

alkaliphilesbiosignaturesDOMmetabolomicsmetagenomicsmethanogenesisserpentinization

Identifiers

PMID36970670
PMCPMC10033605
OpenAlexW4323666036

What OpenQuestion holds

Textfull text, public
LicenceCC BY
reference markers read3
measurements read25
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.