Evidence map›Paper›PMID 36970396›Full record

ArticleNature cardiovascular research2022

Spatiotemporal transcriptomics reveals pathogenesis of viral myocarditis.

Madhav Mantri, Meleana M Hinchman, David W McKellar, Michael F Z Wang, Shaun T Cross, John S L Parker, Iwijn De Vlaminck

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in Nature cardiovascular research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06889662 (GEAM), which is not on this map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
9.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06889662 recruitingnot on this mapstarted 2025, after this paper: background citation

GEAM: Yield of GEnetic Testing in Arrhythmic Myocarditis

TypeobservationalSponsorScientific Institute San RaffaeleRan2025 to 2027Enrolled262ConditionsMyocarditis, Ventricular Arrythmia
3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 63 citations in OpenAlex.

  1. Insights Into Spatial Transcriptomics: Exploring Recent Technical Developments and Their Diverse Applications.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Review
  2. Review
  3. Article
  4. PD-1/PD-L1 Signaling in Non-ICI Myocarditis.JACC. Basic to translational science · 2026
    Article
  5. Article
  6. PET Imaging of Cardiac Inflammation in Viral Myocarditis Using a DPP4-Targeted Probe.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  7. Review
  8. Article
  9. Article
  10. A temporal and spatial atlas of adaptive immune responses in the lymph node following viral infection.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  11. Article
  12. Review
  13. Article
  14. Systems Virology at Scale.Current opinion in systems biology · 2025
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Advances in Single-Cell Sequencing for Infectious Diseases: Progress and Perspectives.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Madhav MantriNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA.ORCID http://orcid.org/0000-0001-9844-7852
Meleana M HinchmanBaker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA.
David W McKellarNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA.
Michael F Z WangNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA.
Shaun T CrossNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA.
John S L ParkerBaker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, USA. jsp7@cornell.edu.ORCID http://orcid.org/0000-0003-4487-4175
Iwijn De VlaminckNancy E. and Peter C. Meinig School of Biomedical Engineering, Cornell University, Ithaca, NY, USA. vlaminck@cornell.edu.ORCID http://orcid.org/0000-0001-6085-7311
Cornell University · US

Funding

Precision monitoring of kidney transplants via single-cell and single-molecule sequencingDP2AI138242 · NIAID · CORNELL UNIVERSITY · PI DE VLAMINCK, IWIJN · 2017 to 2017
$2.3M
Host-Microbe Interactions that Determine Host Traits and DiseaseT32AI145821 · NIAID · CORNELL UNIVERSITY · PI LAZZARO, BRIAN · 2020 to 2024
$1.9M
Droplet-Assisted RNA targeting by single-cell sequencing to dissect the single-cell heterogeneity of RNA virus infectionR21AI144557 · NIAID · CORNELL UNIVERSITY · PI DE VLAMINCK, IWIJN, PARKER, JOHN S · 2019 to 2020
$432k
NIAID NIH HHS DP2 AI138242NIAID NIH HHS R21 AI144557NIAID NIH HHS T32 AI145821
6 · The paper itself

Abstract

A significant fraction of sudden death in children and young adults is due to viral myocarditis, an inflammatory disease of the heart. In this study, by using integrated single-cell and spatial transcriptomics, we created a high-resolution, spatially resolved transcriptome map of reovirus-induced myocarditis in neonatal mouse hearts. We assayed hearts collected at three timepoints after infection and studied the temporal, spatial and cellular heterogeneity of host-virus interactions. We further assayed the intestine, the primary site of reovirus infection, to establish a full chronology of molecular events that ultimately lead to myocarditis. We found that inflamed endothelial cells recruit cytotoxic T cells and undergo pyroptosis in the myocarditic tissue. Analyses of spatially restricted gene expression in myocarditic regions and the border zone identified immune-mediated cell-type-specific injury and stress responses. Overall, we observed a complex network of cellular phenotypes and spatially restricted cell-cell interactions associated with reovirus-induced myocarditis in neonatal mice.

Identifiers

PMID36970396
PMCPMC10035375
OpenAlexW4304084043

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.