Evidence map›Paper›PMID 36969744›Full record

ArticleCancer research communications2022

Under-Representation of Racial Groups in Genomics Studies of Gastroenteropancreatic Neuroendocrine Neoplasms.

Brendon R Herring, Andrew Bonner, Rachael E Guenter, Selwyn Vickers, Clayton Yates, Goo Lee, Deepti Dhall, Herbert Chen, J Bart Rose

Open access · goldFull text read
In one paragraph

Article in Cancer research communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Brendon R HerringDepartment of Surgery, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.ORCID 0000-0002-7581-5744
Andrew BonnerDepartment of Surgery, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.ORCID 0000-0002-5210-0279
Rachael E GuenterDepartment of Surgery, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.
Selwyn VickersDepartment of Surgery, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.ORCID 0000-0003-3133-5543
Clayton YatesDepartment of Biology, Tuskegee University, Tuskegee, Alabama.ORCID 0000-0001-5420-9852
Goo LeeDepartment of Pathology, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.ORCID 0000-0003-3025-5234
Deepti DhallDepartment of Pathology, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.
Herbert ChenDepartment of Surgery, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.
J Bart RoseDepartment of Surgery, University of Alabama at Birmingham School of Medicine, Birmingham, Alabama.ORCID 0000-0002-0471-3978
University of Alabama at Birmingham · USTuskegee University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008361 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YACOUBIAN, TALENE ALENE · 1992 to 2024
$16.8M
Targeted Treatment of Metastatic Gastroenteropancreatic Neuroendocrine TumorsK08CA234209 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ROSE, JOHN B · 2019 to 2023
$848k
Characterizing the Role of NOTCH2 in Neuroendocrine TumorsF31CA260945 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HERRING, BRENDON ROBERT · 2022 to 2024
$125k
NCI NIH HHS F31 CA260945NCI NIH HHS K08 CA234209NIGMS NIH HHS T32 GM008361
6 · The paper itself

Abstract

Not all populations are poised to benefit from advancing genomics in gastroenteropancreatic neuroendocrine neoplasms (GEP-NEN), as genomics have focused on White patients. This study aimed to evaluate racial populations represented in genomic studies of GEP-NENs and to provide evidence of differential genomic findings between racial groups in GEP-NENs. Manuscripts analyzing DNA, RNA, or DNA methylation in GEP-NENs were queried using PUBMED and EMBASE. NIH race/ethnicity term frequency was then determined by Natural Language Processing, followed by manual evaluation of tumor types and subjects by racial group. IHC of institutional tissue micro-arrays and analysis of AACR GENIE data analyzed was performed to determine mutational differences between Black and White pancreatic NEN (pNEN) patients. 313 manuscripts conducted the requisite genomic analyses, 16 of which included subject race data. Race data were included in 13/184 DNA, 4/107 RNA, and 1/54 DNA Methylation analyses. These studies included 89% White subjects ( Significance: There is little diversity in genomic studies of GEP-NENs, which may exhibit clinically impactful variation in their tumor biology among racial groups. Improved diversity in such studies is imperative for understanding this variation and its potential impacts on disease prevention, diagnosis, therapeutic targeting, and clinical outcomes.

Indexed as

Intestinal NeoplasmsNeuroendocrine TumorsPancreatic NeoplasmsStomach NeoplasmsGenomicsHumansRacial GroupsRNARNA

Identifiers

PMID36969744
PMCPMC10035394
OpenAlexW4295135650

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read119
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.