Evidence map›Paper›PMID 36968587›Full record

ArticleFrontiers in genetics2023

MiRNA-Seq reveals key MicroRNAs involved in fat metabolism of sheep liver.

Xiaojuan Fei, Meilin Jin, Zehu Yuan, Taotao Li, Zengkui Lu, Huihua Wang, Jian Lu, Kai Quan, Junxiang Yang, Maochang He and 3 more

Open access · goldFull text read
In one paragraph

Article in Frontiers in genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Xiaojuan FeiInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Meilin JinInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Zehu YuanJoint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education, Yangzhou University, Yangzhou, China.
Taotao LiInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Zengkui LuLanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Lanzhou, China.
Huihua WangInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Jian LuNational Animal Husbandry Service, Beijing, China.
Kai QuanCollege of Animals Science and Technology, Henan University of Animal Husbandry and Economy, Zhengzhou, China.
Junxiang YangGansu Institute of Animal Husbandry and Veterinary Medicine, Pingliang, China.
Maochang HeGansu Institute of Animal Husbandry and Veterinary Medicine, Pingliang, China.
Tingpu WangCollege of Bioengineering and Biotechnology, TianShui Normal University, Tianshui, China.
Yuqin WangCollege of Animals Science and Technology, Henan University of Science and Technology, Luoyang, China.
Caihong WeiInstitute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Chinese Academy of Agricultural Sciences · CNQingdao Institute of Animal Husbandry and Veterinary Medicine · CNHenan University · CNHenan University of Science and Technology · CNNational Animal Husbandry Service · CNTianshui Normal University · CNYangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is a genetic difference between Hu sheep (short/fat-tailed sheep) and Tibetan sheep (short/thin-tailed sheep) in tail type, because of fat metabolism. Previous studies have mainly focused directly on sheep tail fat, which is not the main organ of fat metabolism. The function of miRNAs in sheep liver fat metabolism has not been thoroughly elucidated. In this study, miRNA-Seq was used to identify miRNAs in the liver tissue of three Hu sheep (short/fat-tailed sheep) and three Tibetan sheep (short/thin-tailed sheep) to characterize the differences in fat metabolism of sheep. In our study, Hu sheep was in a control group, we identified 11 differentially expressed miRNAs (DE miRNAs), including six up-regulated miRNAs and five down-regulated miRNAs. Miranda and RNAhybrid were used to predict the target genes of DE miRNAs, obtaining 3,404 target genes. A total of 115 and 67 GO terms as well as 54 and 5 KEGG pathways were significantly (padj < 0.05) enriched for predicted 3,109 target genes of up-regulated and 295 target genes of down-regulated miRNAs, respectively. oar-miR-432 was one of the most up-regulated miRNAs between Hu sheep and Tibetan sheep. And SIRT1 is one of the potential target genes of oar-miR-432. Furthermore, functional validation using the dual-luciferase reporter assay indicated that the up-regulated miRNA; oar-miR-432 potentially targeted sirtuin 1 (SIRT1) expression. Then, the oar-miR-432 mimic transfected into preadipocytes resulted in inhibited expression of SIRT1. This is the first time reported that the expression of SIRT1 gene was regulated by oar-miR-432 in fat metabolism of sheep liver. These results could provide a meaningful theoretical basis for studying the fat metabolism of sheep.

Indexed as

fat metabolismHu sheeplivermiRNATibetan sheep

Identifiers

PMID36968587
PMCPMC10035661
OpenAlexW4323667193

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read16
table measurements read1
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.