Evidence map›Paper›PMID 36968078›Full record

ArticleiScience2023

Identification of actionable targets for breast cancer intervention using a diversity outbred mouse model.

Jennifer B Jacob, Kuang-Chung Wei, Gerold Bepler, Joyce D Reyes, Andi Cani, Lisa Polin, Kathryn White, Seongho Kim, Nerissa Viola, Julie McGrath and 10 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Obesity-Associated Colorectal Cancer.International journal of molecular sciences · 2024
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 1 country.

Jennifer B JacobDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Kuang-Chung WeiDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Gerold BeplerDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Joyce D ReyesDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Andi CaniDepartment of Internal Medicine, Rogel Cancer Center, University of Michigan, Ann Arbor, MI, 48109, USA.
Lisa PolinDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Kathryn WhiteDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Seongho KimDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Nerissa ViolaDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Julie McGrathClinical and Translational Research, Caris Life Sciences, Irving, TX75039, USA.
Anthony GuastellaClinical and Translational Research, Caris Life Sciences, Irving, TX75039, USA.
CongCong YinDepartment of Immunology, Henry Ford Health System, Detroit, MI48202, USA.
Qing-Shen MiDepartment of Immunology, Henry Ford Health System, Detroit, MI48202, USA.
Benjamin L KidderDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Kay-Uwe WagnerDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Stuart RatnerDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Victoria PhillipsDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Joanne XiuClinical and Translational Research, Caris Life Sciences, Irving, TX75039, USA.
Prahlad ParajuliDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Wei-Zen WeiDepartment of Oncology, Karmanos Cancer Institute, Wayne State University, Detroit, MI, 48201, USA.
Wayne State University · USCaris Life Sciences (United States) · USHenry Ford Health System · USUniversity of Michigan · US

Funding

Tumor Biology and Microenvironment (Program 1)P30CA022453 · NCI · WAYNE STATE UNIVERSITY · PI Julie Lynn Boerner · 1985 to 2026
$68.4M
DEVELOPMENT OF ERBB2 BASED BREAST CANCER VACCINESR01CA076340 · NCI · WAYNE STATE UNIVERSITY · PI WEI, WEI-ZEN · 1998 to 2020
$5.2M
NCI NIH HHS P30 CA022453NCI NIH HHS R01 CA076340
6 · The paper itself

Abstract

HER2-targeted therapy has improved breast cancer survival, but treatment resistance and disease prevention remain major challenges. Genes that enable HER2/Neu oncogenesis are the next intervention targets. A bioinformatics discovery platform of HER2/Neu-expressing Diversity Outbred (DO) F1 Mice was established to identify cancer-enabling genes. Quantitative Trait Loci (QTL) associated with onset ages and growth rates of spontaneous mammary tumors were sought. Twenty-six genes in 3 QTL contain sequence variations unique to the genetic backgrounds that are linked to aggressive tumors and 21 genes are associated with human breast cancer survival. Concurrent identification of TSC22D3, a transcription factor, and its target gene LILRB4, a myeloid cell checkpoint receptor, suggests an immune axis for regulation, or intervention, of disease. We also investigated TIEG1 gene that impedes tumor immunity but suppresses tumor growth. Although not an actionable target, TIEG1 study revealed genetic regulation of tumor progression, forming the basis of the genetics-based discovery platform.

Indexed as

CancerGenomicsMolecular biologyTranscriptomics

Identifiers

PMID36968078
PMCPMC10034465
OpenAlexW4322765722

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.