Evidence map›Paper›PMID 36963402›Full record

ArticleCell chemical biology2023

Mitigating the risk of antimalarial resistance via covalent dual-subunit inhibition of the Plasmodium proteasome.

Ioanna Deni, Barbara H Stokes, Kurt E Ward, Kate J Fairhurst, Charisse Flerida A Pasaje, Tomas Yeo, Shirin Akbar, Heekuk Park, Ryan Muir, Daniella S Bick and 16 more

Open access · hybridAbstract read
In one paragraph

Article in Cell chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Ubiquitin-proteasome system inFrontiers in medicine · 2024
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Structure-Guided Optimization of Novel Inhibitors ofJournal of medicinal chemistry · 2026
    Article
  6. Article
  7. Article
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  9. A recombinant expression system for thebioRxiv : the preprint server for biology · 2025
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  10. Review
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  14. Review
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  16. Article
  17. Article
  18. Antimalarial drug discovery: progress and approaches.Nature reviews. Drug discovery · 2023
    Review
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 12 institutions in 4 countries.

Ioanna DeniCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA.
Barbara H StokesCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA.
Kurt E WardCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA.
Kate J FairhurstCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA.
Charisse Flerida A PasajeDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
Tomas YeoCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA.
Shirin AkbarSchool of Molecular Biosciences, University of Glasgow, Glasgow, Scotland, UK.
Heekuk ParkDivision of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, New York, NY, USA.
Ryan MuirDepartment of Pathology, Stanford University School of Medicine, Stanford, CA, USA.
Daniella S BickCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA.
Wenhu ZhanDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY, USA.
Hao ZhangDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY, USA.
Yi Jing LiuDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY, USA.
Caroline L NgGlobal Center for Health Security, University of Nebraska Medical Center, Omaha, NE, USA; Department of Biology, University of Nebraska Omaha, Omaha, NE, USA; Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA.
Laura A KirkmanDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY, USA; Division of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, NY.
Jehad AlmalitiScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA; Department of Pharmaceutical Sciences, College of Pharmacy, The University of Jordan, Amman, Jordan.
Alexandra E GouldTakeda Development Center Americas, Inc., Cambridge, MA 02139, USA.
Maëlle DuffeyMedicines for Malaria Venture, Geneva, Switzerland.
Anthony J O'DonoghueSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
Anne-Catrin UhlemannDivision of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, New York, NY, USA.
Jacquin C NilesDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
Paula C A da FonsecaSchool of Molecular Biosciences, University of Glasgow, Glasgow, Scotland, UK.
William H GerwickScripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.
Gang LinDepartment of Microbiology and Immunology, Weill Cornell Medicine, New York, NY, USA.
Matthew BogyoDepartment of Pathology, Stanford University School of Medicine, Stanford, CA, USA.
David A FidockCenter for Malaria Therapeutics and Antimicrobial Resistance and Department of Microbiology and Immunology, Columbia University Irving Medical Center, New York, NY, USA; Division of Infectious Diseases, Department of Medicine, Columbia University Irving Medical Center, New York, NY, USA. Electronic address: df2260@cumc.columbia.edu.
Columbia University Irving Medical Center · USCornell University · USMassachusetts Institute of Technology · USStanford University · USUniversity of Glasgow · GBWeill Cornell Medicine · USMedicines for Malaria Venture · CHScripps Institution of Oceanography · USTakeda (United States) · USUniversity of California, San Diego · USUniversity of Jordan · JOUniversity of Nebraska at Omaha · US

Funding

Selective Plasmodium proteasome inhibitors as novel multi-stage antimalarialsR01AI143714 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI Gang Lin · 2019 to 2026
$6.1M
Defining P. falciparum resistance to artemisinin-based combination therapiesR01AI109023 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FIDOCK, DAVID A · 2014 to 2025
$4.4M
Proteasome inhibitors against mucosal protozoan pathogensR01AI158612 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ECKMANN, LARS, O'DONOGHUE, ANTHONY JOHN · 2021 to 2025
$3.2M
UC San Diego RAPID Faculty Development Program in Infectious DiseasesR25AI147376 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADRIANA H TREMOULET, Joann Trejo · 2020 to 2026
$2.5M
Parasite-specific proteasome inhibitors to combat multi-drug resistant malariaR33AI127581 · NIAID · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2019 to 2021
$1.4M
Parasite-specific proteasome inhibitors to combat multi-drug resistant malariaR21AI127581 · NIAID · STANFORD UNIVERSITY · PI BOGYO, MATTHEW · 2017 to 2018
$447k
Selective proteasome inhibitors for trichomoniasisR21AI146387 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ECKMANN, LARS, O'DONOGHUE, ANTHONY JOHN · 2019 to 2020
$433k
Exploring the proteasome as a new drug target to treat schistosomiasisR21AI133393 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI O'DONOGHUE, ANTHONY JOHN · 2017 to 2018
$426k
Medical Research Council MC_UP_1201/5NIAID NIH HHS R01 AI109023NIAID NIH HHS R01 AI143714NIAID NIH HHS R01 AI158612NIAID NIH HHS R21 AI127581NIAID NIH HHS R21 AI133393NIAID NIH HHS R21 AI146387NIAID NIH HHS R25 AI147376NIAID NIH HHS R33 AI127581
6 · The paper itself

Abstract

The Plasmodium falciparum proteasome constitutes a promising antimalarial target, with multiple chemotypes potently and selectively inhibiting parasite proliferation and synergizing with the first-line artemisinin drugs, including against artemisinin-resistant parasites. We compared resistance profiles of vinyl sulfone, epoxyketone, macrocyclic peptide, and asparagine ethylenediamine inhibitors and report that the vinyl sulfones were potent even against mutant parasites resistant to other proteasome inhibitors and did not readily select for resistance, particularly WLL that displays covalent and irreversible binding to the catalytic β2 and β5 proteasome subunits. We also observed instances of collateral hypersensitivity, whereby resistance to one inhibitor could sensitize parasites to distinct chemotypes. Proteasome selectivity was confirmed using CRISPR/Cas9-edited mutant and conditional knockdown parasites. Molecular modeling of proteasome mutations suggested spatial contraction of the β5 P1 binding pocket, compromising compound binding. Dual targeting of P. falciparum proteasome subunits using covalent inhibitors provides a potential strategy for restoring artemisinin activity and combating the spread of drug-resistant malaria.

Indexed as

AntimalarialsArtemisininsMalaria, FalciparumPlasmodiumHumansProteasome Endopeptidase ComplexProteasome InhibitorsAntimalarialsartemisininArtemisininsProteasome Endopeptidase ComplexProteasome Inhibitorsartemisininconditional knockdowncovalent inhibitorsCRISPR/Cas9 gene editingdrug discoverymalariaminimum inoculum of resistancemolecular modelingPlasmodium falciparumproteasome

Identifiers

PMID36963402
PMCPMC10198959
OpenAlexW4360610819

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.