Evidence map›Paper›PMID 36962431›Full record

ArticlePLOS global public health2022

qPCR in a suitcase for rapid Plasmodium falciparum and Plasmodium vivax surveillance in Ethiopia.

Lise Carlier, Sarah Cate Baker, Tiffany Huwe, Delenasaw Yewhalaw, Werissaw Haileselassie, Cristian Koepfli

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In one paragraph

Article in PLOS global public health, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 4 countries.

Lise CarlierTrinity College Dublin, Dublin, Ireland.
Sarah Cate BakerTrinity College Dublin, Dublin, Ireland.
Tiffany HuweDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana, United States of America.ORCID https://orcid.org/0000-0001-8027-8376
Delenasaw YewhalawTropical and Infectious Disease Research Center, Jimma University, Jimma, Ethiopia.ORCID https://orcid.org/0000-0002-2907-9360
Werissaw HaileselassieSchool of Public Health, Addis Ababa University, Addis Ababa, Ethiopia.
Cristian KoepfliDepartment of Biological Sciences & Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana, United States of America.ORCID https://orcid.org/0000-0002-9354-0414
University of Notre Dame · USAddis Ababa University · ETFIND · CHJimma University · ETOregon Health & Science University · US

Funding

A Novel Droplet Digital PCR Method for Population-based Plasmodium falciparum hrp2 Deletion DiagnosisR21AI137891 · NIAID · UNIVERSITY OF NOTRE DAME · PI KOEPFLI, CRISTIAN · 2018 to 2019
$425k
NIAID NIH HHS R21 AI137891
6 · The paper itself

Abstract

Many Plasmodium spp. infections, both in clinical and asymptomatic patients, are below the limit of detection of light microscopy or rapid diagnostic test (RDT). Molecular diagnosis by qPCR can be valuable for surveillance, but is often hampered by absence of laboratory capacity in endemic countries. To overcome this limitation, we optimized and tested a mobile qPCR laboratory for molecular diagnosis in Ziway, Ethiopia, where transmission intensity is low. Protocols were optimized to achieve high throughput and minimize costs and weight for easy transport. 899 samples from febrile patients and 1021 samples from asymptomatic individuals were screened by local microscopy, RDT, and qPCR within a period of six weeks. 34/52 clinical Plasmodium falciparum infections were missed by microscopy and RDT. Only 4 asymptomatic infections were detected. No hrp2 deletions were observed among 25 samples typed, but 19/24 samples carried hrp3 deletions. The majority (25/41) of Plasmodium vivax infections (1371 samples screened) were found among asymptomatic individuals. All asymptomatic P. vivax infections were negative by microscopy and RDT. In conclusion, the mobile laboratory described here can identify hidden parasite reservoirs within a short period of time, and thus inform malaria control activities.

Identifiers

PMID36962431
PMCPMC10021179
OpenAlexW4288051752

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read17
identifiers read4
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.