Evidence map›Paper›PMID 36962200›Full record

ArticlePLOS global public health2022

Pooling sputum for Xpert MTB/RIF and Xpert Ultra testing during the Covid-19 pandemic in Lao People's Democratic Republic.

Vibol Iem, Phonenaly Chittamany, Sakhone Suthepmany, Souvimone Siphanthong, Silaphet Somphavong, Konstantina Kontogianni, James Dodd, Jahangir Akber Mahmud Khan, Jose Dominguez, Tom Wingfield and 2 more

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Article in PLOS global public health, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Vibol IemNational Tuberculosis Control Center, Vientiane, Lao People's Democratic Republic.ORCID https://orcid.org/0000-0001-6155-1402
Phonenaly ChittamanyNational Tuberculosis Control Center, Vientiane, Lao People's Democratic Republic.
Sakhone SuthepmanyNational Tuberculosis Control Center, Vientiane, Lao People's Democratic Republic.
Souvimone SiphanthongNational Tuberculosis Control Center, Vientiane, Lao People's Democratic Republic.
Silaphet SomphavongCenter of Infectiology Lao Christophe Mérieux, Vientiane, Lao People's Democratic Republic.
Konstantina KontogianniLiverpool School of Tropical Medicine, Liverpool, United Kingdom.ORCID https://orcid.org/0000-0002-5353-3682
James DoddLiverpool School of Tropical Medicine, Liverpool, United Kingdom.
Jahangir Akber Mahmud KhanUniversity of Gothenburg, Health Economics and Policy Unit, School of Public Health and Community Medicine, Gothenburg, Sweden.
Jose DominguezInstitut d'Investigació Germans Trias i Pujol, CIBER Enfermedades Respiratorias, and Universitat Autònoma de Barcelona, Barcelona, Spain.
Tom WingfieldLiverpool School of Tropical Medicine, Liverpool, United Kingdom.ORCID https://orcid.org/0000-0001-8433-6887
Jacob CreswellStop TB Partnership, Innovations and Grants, Geneva, Switzerland.ORCID https://orcid.org/0000-0002-4885-940X
Luis Eduardo CuevasLiverpool School of Tropical Medicine, Liverpool, United Kingdom.ORCID https://orcid.org/0000-0002-6581-0587

Funding

Medical Research Council MR/V004832/1Wellcome Trust
6 · The paper itself

Abstract

The global Covid-19 pandemic has limited access to molecular TB diagnostics and National Programmes are struggling to maintain essential services. The pooling method (testing several samples together) could reduce the number of cartridges and staff time needed for TB diagnosis but has not been tested within the pandemic. We conducted two independent cross-sectional surveys. Pools composed of four sputum samples were tested using either Xpert-MTB/RIF or Xpert-Ultra. Pooled and individual results were compared to determine the level of agreement. Each survey included 840 participants and 210 pools. In the Xpert MTB/RIF survey, 77/81 (sensitivity 95.1%, 95%CI 87.8%-98.6%) pools containing ≥1 positive sample tested MTB-positive and 4/81 (4.9%, 95%CI 1.4%-12.2%) tested MTB-negative. All 129/129 pools containing MTB-negative samples tested MTB-negative (specificity 100%, 95%CI 97.2%-100%), with 98.1% agreement (Kappa: 0.959). In the Xpert-Ultra survey, 70/70 (sensitivity 100%, 95%CI 94.9%-100%) pools containing ≥ 1 MTB-positive sample tested MTB-positive and 140/140 (specificity 100%, 95%CI 97.4%-100%) pools containing only MTB-negative samples tested MTB-negative, with 100% agreement (Kappa: 1). Pooled testing with Xpert-MTB/RIF and Xpert-Ultra saved 38.3% and 41.7% (322/840 and 350/840, respectively) in cartridge costs alone. The pooling method with Xpert-MTB/RIF and Xpert-Ultra has similar performance to individual testing and can reduce the number of cartridges needed. These efficiencies can facilitate maintenance of stocks and sustain essential services as countries face difficulties for laboratory procurement during the pandemic and will provide cost and time savings post-pandemic.

Identifiers

PMID36962200
PMCPMC10022270

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.