Evidence map›Paper›PMID 36961855›Full record

ArticlePloS one2023

Field assessment of BinaxNOW antigen tests as COVID-19 treatment entry point at a community testing site in San Francisco during evolving omicron surges.

John Schrom, Carina Marquez, Chung-Yu Wang, Aditi Saxena, Anthea M Mitchell, Salu Ribeiro, Genay Pilarowski, Robert Nakamura, Susana Rojas, Douglas Black and 14 more

Open access · goldFull text read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 5 institutions in 1 country.

John SchromDivision of HIV, Infectious Diseases, and Global Medicine, University of California, San Francisco, San Francisco, California, United States of America.
Carina MarquezDivision of HIV, Infectious Diseases, and Global Medicine, University of California, San Francisco, San Francisco, California, United States of America.
Chung-Yu WangChan Zuckerberg Biohub, San Francisco, California, United States of America.
Aditi SaxenaChan Zuckerberg Biohub, San Francisco, California, United States of America.ORCID 0000-0001-5736-5180
Anthea M MitchellChan Zuckerberg Biohub, San Francisco, California, United States of America.
Salu RibeiroUnidos en Salud, San Francisco, California, United States of America.
Genay PilarowskiChan Zuckerberg Biohub, San Francisco, California, United States of America.
Robert NakamuraCalifornia Department of Public Health, Richmond, California, United States of America.
Susana RojasUnidos en Salud, San Francisco, California, United States of America.
Douglas BlackDivision of HIV, Infectious Diseases, and Global Medicine, University of California, San Francisco, San Francisco, California, United States of America.
Maria G Contreras OsegueraUnidos en Salud, San Francisco, California, United States of America.
Edgar Castellanos DiazUnidos en Salud, San Francisco, California, United States of America.
Joselin PayanUnidos en Salud, San Francisco, California, United States of America.
Susy RojasUnidos en Salud, San Francisco, California, United States of America.
Diane JonesUnidos en Salud, San Francisco, California, United States of America.
Valerie Tulier-LaiwaUnidos en Salud and Latino Task Force, San Francisco, California, United States of America.
Aleks ZavaletaUnidos en Salud and Latino Task Force, San Francisco, California, United States of America.
Jacqueline MartinezUnidos en Salud, San Francisco, California, United States of America.
Gabriel ChamieDivision of HIV, Infectious Diseases, and Global Medicine, University of California, San Francisco, San Francisco, California, United States of America.
Carol GlaserCalifornia Department of Public Health, Richmond, California, United States of America.
Kathy JacobsonCalifornia Department of Public Health, Richmond, California, United States of America.
Maya PetersenDivision of Biostatistics, University of California, Berkeley, Berkeley, California, United States of America.
Joseph DeRisiChan Zuckerberg Biohub, San Francisco, California, United States of America.
Diane V HavlirDivision of HIV, Infectious Diseases, and Global Medicine, University of California, San Francisco, San Francisco, California, United States of America.ORCID 0000-0003-0761-3136
United in Health · USChan Zuckerberg Initiative (United States) · USUniversity of California, San Francisco · USCalifornia Department of Public Health · USUniversity of California, Berkeley · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

COVID-19 oral treatments require initiation within 5 days of symptom onset. Although antigen tests are less sensitive than RT-PCR, rapid results could facilitate entry to treatment. We collected anterior nasal swabs for BinaxNOW and RT-PCR testing and clinical data at a walk-up, community site in San Francisco, California between January and June 2022. SARS-CoV-2 genomic sequences were generated from positive samples and classified according to subtype and variant. Monte Carlo simulations were conducted to estimate the expected proportion of SARS-CoV-2 infected persons who would have been diagnosed within 5 days of symptom onset using RT-PCR versus BinaxNOW testing. Among 25,309 persons tested with BinaxNOW, 2,799 had concomitant RT-PCR. 1137/2799 (40.6%) were SARS-CoV-2 RT-PCR positive. We identified waves of predominant omicron BA.1, BA.2, BA.2.12, BA.4, and BA.5 among 720 sequenced samples. Among 1,137 RT-PCR positive samples, 788/1137 (69%) were detected by BinaxNOW; 94% (669/711) of those with Ct value <30 were detected by BinaxNOW. BinaxNOW detection was consistent over lineages. In analyses to evaluate entry to treatment, BinaxNOW detected 81.7% (361/442, 95% CI: 77-85%) of persons with COVID-19 within 5 days of symptom onset. In comparison, RT-PCR (24-hour turnaround) detected 84.2% (372/442, 95% CI: 80-87%) and RT-PCR (48-hour turnaround) detected 67.0% (296/442, 95% CI: 62-71%) of persons with COVID-19 within 5 days of symptom onset. BinaxNOW detected high viral load from anterior nasal swabs consistently across omicron sublineages emerging between January and June of 2022. Simulations support BinaxNOW as an entry point for COVID-19 treatment in a community field setting.

Indexed as

COVID-19COVID-19 Drug TreatmentHumansImmunologic TestsSan FranciscoSARS-CoV-2Sensitivity and Specificity

Identifiers

PMID36961855
PMCPMC10038282
OpenAlexW4360816900

What OpenQuestion holds

Textfull text, public
LicenceCC0
measurements read220
identifiers read7
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.