Evidence map›Paper›PMID 36961484›Full record

ArticleMicrobial genomics2023

Phylogenomic investigation of an outbreak of fluoroquinolone-resistant

Rutaiwan Dusadeepong, Gauthier Delvallez, Sokleaph Cheng, Soda Meng, Navin Sreng, Joanne Letchford, Kimcheng Choun, Syna Teav, Liselotte Hardy, Jan Jacobs and 6 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Environmental health insights · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Rutaiwan DusadeepongBacterial Phylogenomics Group, Pasteur Institute of Cambodia, Phnom Penh, Cambodia.
Gauthier DelvallezMedical Biology Laboratory, Pasteur Institute of Cambodia, Phnom Penh, Cambodia.
Sokleaph ChengMedical Biology Laboratory, Pasteur Institute of Cambodia, Phnom Penh, Cambodia.
Soda MengMedical Biology Laboratory, Pasteur Institute of Cambodia, Phnom Penh, Cambodia.
Navin SrengLaboratory of Environment and Food Safety, Pasteur Institute of Cambodia, Phnom Penh, Cambodia.
Joanne LetchfordDiagnostic Microbiology Development Program, Phnom Penh, Cambodia.
Kimcheng ChounInfectious Disease Department, Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia.
Syna TeavLaboratory Unit, Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia.
Liselotte HardyDepartment of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Jan JacobsDepartment of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Tuyet HoangMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria, Australia.
Torsten SeemannMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria, Australia.
Benjamin P HowdenMicrobiological Diagnostic Unit Public Health Laboratory, Department of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria, Australia.
Philippe GlaserEvolution and Ecology of Antibiotic Resistance Unit, APHP-CNRS-UMR6047, Institut Pasteur-University Paris-Saclay-Université Paris Cité, Paris, France.
Timothy P StinearCentre for Pathogen Genomics, Department of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria, Australia.
Koen VandelannooteBacterial Phylogenomics Group, Pasteur Institute of Cambodia, Phnom Penh, Cambodia.
Institut Pasteur du Cambodge · KHThe University of Melbourne · AUInstituut voor Tropische Geneeskunde · BESihanouk Hospital Center of HOPE · KHCentre National de la Recherche Scientifique · FRDiagnostic Microbiology Development Program · KH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In early 2020, the Medical Biology Laboratory of the Pasteur Institute of Cambodia isolated an unusually high number of fluoroquinolone-resistant

Indexed as

Paratyphoid FeverSalmonella paratyphi AAnti-Bacterial AgentsCambodiaDisease OutbreaksDrug Resistance, BacterialFluoroquinolonesHumansPhylogenySalmonellaSerogroupAnti-Bacterial AgentsFluoroquinolonesantimicrobial resistanceCambodiaphylogenomicsSalmonella enterica Paratyphi Awhole-genome sequencing

Identifiers

PMID36961484
PMCPMC10132074
OpenAlexW4360808239

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.