Evidence map›Paper›PMID 36961279›Full record

ArticleFEBS open bio2023

Single-cell transcriptome analysis of male chicken germ cells reveals changes in signaling pathway-related gene expression profiles during mitotic arrest.

Hyeon Jeong Choi, Kyung Min Jung, Kyung Je Park, Kyung Youn Lee, Seung Je Woo, Jae Yong Han

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. microRNA as an Important Mediator in the Regulation of MaleInternational journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hyeon Jeong ChoiBiomodulation Major, Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, South Korea.
Kyung Min JungBiomodulation Major, Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, South Korea.
Kyung Je ParkBiomodulation Major, Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, South Korea.
Kyung Youn LeeBiomodulation Major, Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, South Korea.
Seung Je WooBiomodulation Major, Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, South Korea.
Jae Yong HanBiomodulation Major, Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, South Korea.ORCID 0000-0003-3413-3277
Seoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitotic arrest is necessary for the embryonic development of germ cells, and thus, it is important to understand the signaling pathways that regulate mitotic arrest. Here, we investigated the signaling pathway dynamics of male embryonic chicken germ cells during mitotic arrest by single-cell transcriptome analysis using germ-cell tracing models. We identified signaling pathways that change at the transcriptional level during chicken male germ-cell development after sex determination. We found that several components of the BMP, Notch, and JAK-STAT signaling pathways were downregulated at the mitotic-arrest stage and were reactivated 1 week after hatching when all germ cells are quiescent after entering mitotic arrest. In addition, the transcriptional levels of components of the MAPK, Hedgehog, and thyroid-hormone signaling pathways were steadily upregulated after mitotic arrest. This suggests the cooperation of multiple signaling pathways during entry into mitotic arrest and subsequent quiescence of chicken male germ cells.

Indexed as

ChickensTranscriptomeAnimalsChick EmbryoGerm CellsMaleSignal TransductionSingle-Cell Gene Expression Analysischickenmale germ cellmitotic arrestsignaling pathwaysingle-cell RNA sequencing

Identifiers

PMID36961279
PMCPMC10153307
OpenAlexW4360805050

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.