Evidence map›Paper›PMID 36960567›Full record

ArticlePlant physiology2023

Paralog editing tunes rice stomatal density to maintain photosynthesis and improve drought tolerance.

Nicholas G Karavolias, Dhruv Patel-Tupper, Kyungyong Seong, Michelle Tjahjadi, Gloria-Alexandra Gueorguieva, Jaclyn Tanaka, Ana Gallegos Cruz, Samantha Lieberman, Lillian Litvak, Douglas Dahlbeck and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
17.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Signaling by a tyrosine-sulfated peptide balances growth and osmotic stress response in rice.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Comprehensive Profiling of the RicePlants (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. ERECTA-family receptor kinases: versatile regulators of plant developmental signaling.The Plant journal : for cell and molecular biology · 2026
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Mutational scanning of TnpB reveals latent activity for genome editing.bioRxiv : the preprint server for biology · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Transcriptional gene network involved in drought stress response: application for crop breeding in the context of climate change.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Nicholas G KaravoliasPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0003-1213-771X
Dhruv Patel-TupperPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-0642-1485
Kyungyong SeongPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-7711-0107
Michelle TjahjadiInnovative Genomics Institute, Berkeley, CA 94704, USA.ORCID 0009-0001-6357-0057
Gloria-Alexandra GueorguievaPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-2299-8831
Jaclyn TanakaInnovative Genomics Institute, Berkeley, CA 94704, USA.ORCID 0000-0002-5662-6577
Ana Gallegos CruzInnovative Genomics Institute, Berkeley, CA 94704, USA.ORCID 0000-0002-6840-922X
Samantha LiebermanInnovative Genomics Institute, Berkeley, CA 94704, USA.ORCID 0000-0001-5631-9609
Lillian LitvakInnovative Genomics Institute, Berkeley, CA 94704, USA.ORCID 0009-0004-1156-2735
Douglas DahlbeckPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0003-3605-2526
Myeong-Je ChoInnovative Genomics Institute, Berkeley, CA 94704, USA.ORCID 0000-0002-7638-7235
Krishna K NiyogiPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0001-7229-2071
Brian J StaskawiczPlant and Microbial Biology Department, UC Berkeley, Berkeley, CA 94720, USA.ORCID 0000-0002-9711-3962
Innovative Genomics Institute · USLawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

A Zeiss LSM 710 confocal microscope for the Biological Imaging Facility at the US10RR026866 · NCRR · UNIVERSITY OF CALIFORNIA BERKELEY · PI RUZIN, STEVEN EARL · 2010 to 2010
$419k
NCRR NIH HHS S10 RR026866
6 · The paper itself

Abstract

Rice (Oryza sativa) is of paramount importance for global nutrition, supplying at least 20% of global calories. However, water scarcity and increased drought severity are anticipated to reduce rice yields globally. We explored stomatal developmental genetics as a mechanism for improving drought resilience in rice while maintaining yield under climate stress. CRISPR/Cas9-mediated knockouts of the positive regulator of stomatal development STOMAGEN and its paralog EPIDERMAL PATTERNING FACTOR-LIKE10 (EPFL10) yielded lines with ∼25% and 80% of wild-type stomatal density, respectively. epfl10 lines with moderate reductions in stomatal density were able to conserve water to similar extents as stomagen lines but did not suffer from the concomitant reductions in stomatal conductance, carbon assimilation, or thermoregulation observed in stomagen knockouts. Moderate reductions in stomatal density achieved by editing EPFL10 present a climate-adaptive approach for safeguarding yield in rice. Editing the paralog of STOMAGEN in other species may provide a means for tuning stomatal density in agriculturally important crops beyond rice.

Indexed as

OryzaPlant StomataDrought ResistanceDroughtsPhotosynthesis

Identifiers

PMID36960567
PMCPMC10231365
OpenAlexW4360804458

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.