Evidence map›Paper›PMID 36960278›Full record

ArticleFrontiers in microbiology2023

Mycobacterial IHF is a highly dynamic nucleoid-associated protein that assists HupB in organizing chromatin.

Joanna Hołówka, Tomasz Łebkowski, Helge Feddersen, Giacomo Giacomelli, Karolina Drużka, Łukasz Makowski, Damian Trojanowski, Natalia Broda, Marc Bramkamp, Jolanta Zakrzewska-Czerwińska

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In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Joanna HołówkaDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
Tomasz ŁebkowskiDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
Helge FeddersenInstitute for General Microbiology, Christian-Albrechts-University, Kiel, Germany.
Giacomo GiacomelliInstitute for General Microbiology, Christian-Albrechts-University, Kiel, Germany.
Karolina DrużkaDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
Łukasz MakowskiDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
Damian TrojanowskiDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
Natalia BrodaDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
Marc BramkampInstitute for General Microbiology, Christian-Albrechts-University, Kiel, Germany.
Jolanta Zakrzewska-CzerwińskaDepartment of Molecular Microbiology, University of Wrocław, Wrocław, Poland.
University of Wrocław · PLChristian-Albrechts-Universität zu Kiel · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleoid-associated proteins (NAPs) crucially contribute to organizing bacterial chromatin and regulating gene expression. Among the most highly expressed NAPs are the HU and integration host factor (IHF) proteins, whose functional homologues, HupB and mycobacterial integration host factor (mIHF), are found in mycobacteria. Despite their importance for the pathogenicity and/or survival of tubercle bacilli, the role of these proteins in mycobacterial chromosome organization remains unknown. Here, we used various approaches, including super-resolution microscopy, to perform a comprehensive analysis of the roles of HupB and mIHF in chromosome organization. We report that HupB is a structural agent that maintains chromosome integrity on a local scale, and that the lack of this protein alters chromosome morphology. In contrast, mIHF is a highly dynamic protein that binds DNA only transiently, exhibits susceptibility to the chromosomal DNA topology changes and whose depletion leads to the growth arrest of tubercle bacilli. Additionally, we have shown that depletion of

Indexed as

bacterial chromosome compactionHupBmycobacteriamycobacterial IHFnucleoid-associated protein

Identifiers

PMID36960278
PMCPMC10028186
OpenAlexW4323363382

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read110
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.