Evidence map›Paper›PMID 36959933›Full record

ArticleFrontiers in plant science2023

Analysis of the molecular and biochemical mechanisms involved in the symbiotic relationship between

Yu Gao, Siyuan Huang, Yujie Wang, Hongxin Lin, Zhiyong Pan, Shubao Zhang, Jie Zhang, Wenquan Wang, Shanhan Cheng, Yinhua Chen

Open access · goldFull text read
In one paragraph

Article in Frontiers in plant science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Adaptive Responses of Tropical Crops: A Multi-Scale Omics Integrated Perspective.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Yu GaoSanya Nanfan Research Institute of Hainan University, School of Life Science, Hainan University, Haikou, Hainan, China.
Siyuan HuangCollege of Tropical Crops, Hainan University, Haikou, Hainan, China.
Yujie WangSanya Nanfan Research Institute of Hainan University, School of Life Science, Hainan University, Haikou, Hainan, China.
Hongxin LinSoil and Fertilizer & Resources and Environment Institute, Jiangxi Academy of Agricultural Sciences, Nanchang, Jiangxi, China.
Zhiyong PanCollege of Horticulture and Forestry of Huazhong Agricultural University, Wuhan, China.
Shubao ZhangSanya Nanfan Research Institute of Hainan University, School of Life Science, Hainan University, Haikou, Hainan, China.
Jie ZhangCollege of Tropical Crops, Hainan University, Haikou, Hainan, China.
Wenquan WangCollege of Tropical Crops, Hainan University, Haikou, Hainan, China.
Shanhan ChengSanya Nanfan Research Institute of Hainan University, School of Life Science, Hainan University, Haikou, Hainan, China.
Yinhua ChenSanya Nanfan Research Institute of Hainan University, School of Life Science, Hainan University, Haikou, Hainan, China.
Hainan University · CNHuazhong Agricultural University · CNJiangxi Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Plants and arbuscular mycorrhizal fungi (AMF) mutualistic interactions are essential for sustainable agriculture production. Although it is shown that AMF inoculation improves cassava physiological performances and yield traits, the molecular mechanisms involved in AM symbiosis remain largely unknown. Herein, we integrated metabolomics and transcriptomics analyses of symbiotic (Ri) and asymbiotic (CK) cassava roots and explored AM-induced biochemical and transcriptional changes. Results: Three weeks (3w) after AMF inoculations, proliferating fungal hyphae were observable, and plant height and root length were significantly increased. In total, we identified 1,016 metabolites, of which 25 were differentially accumulated (DAMs) at 3w. The most highly induced metabolites were 5-aminolevulinic acid, L-glutamic acid, and lysoPC 18:2. Transcriptome analysis identified 693 and 6,481 differentially expressed genes (DEGs) in the comparison between CK (3w) against Ri at 3w and 6w, respectively. Functional enrichment analyses of DAMs and DEGs unveiled transport, amino acids and sugar metabolisms, biosynthesis of secondary metabolites, plant hormone signal transduction, phenylpropanoid biosynthesis, and plant-pathogen interactions as the most differentially regulated pathways. Potential candidate genes, including nitrogen and phosphate transporters, transcription factors, phytohormone, sugar metabolism-related, and SYM (symbiosis) signaling pathway-related, were identified for future functional studies. Discussion: Our results provide molecular insights into AM symbiosis and valuable resources for improving cassava production.

Indexed as

arbuscular mycorrhizacandidate genecassavafungimetabolomesymbiosistranscriptome

Identifiers

PMID36959933
PMCPMC10028151
OpenAlexW4323363421

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read46
table measurements read10
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.