Evidence map›Paper›PMID 36959508›Full record

ArticleNature microbiology2023

ATG7 and ATG14 restrict cytosolic and phagosomal Mycobacterium tuberculosis replication in human macrophages.

Beren Aylan, Elliott M Bernard, Enrica Pellegrino, Laure Botella, Antony Fearns, Natalia Athanasiadi, Claudio Bussi, Pierre Santucci, Maximiliano G Gutierrez

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 72 citations in OpenAlex.

  1. Review
  2. Review
  3. EliminateJournal of medical microbiology · 2026
    Article
  4. HowVaccines · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. PIKfyve mediates the maturation of mycobacteria-containing vesicles.Frontiers in cellular and infection microbiology · 2026
    Article
  11. Article
  12. Review
  13. Article
  14. Control of antigen presentation on MHC-I by a bacterial secretion system.bioRxiv : the preprint server for biology · 2025
    Article
  15. Review
  16. Review
  17. SMURF2 inhibits autophagic control ofbioRxiv : the preprint server for biology · 2025
    Article
  18. Cysteine reactivity profiling identifies host regulators ofbioRxiv : the preprint server for biology · 2025
    Article
  19. Atg7 in CD4Clinical and translational medicine · 2025
    Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 3 countries.

Beren Aylan *Host-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.
Elliott M Bernard *Host-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.ORCID http://orcid.org/0000-0003-2761-3790
Enrica Pellegrino *Host-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.
Laure BotellaHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.ORCID http://orcid.org/0000-0003-2776-4118
Antony FearnsHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.
Natalia AthanasiadiHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.
Claudio BussiHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.ORCID http://orcid.org/0000-0002-9396-9042
Pierre SantucciHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK.
Maximiliano G GutierrezHost-Pathogen Interactions in Tuberculosis Laboratory, The Francis Crick Institute, London, UK. MAX.G@CRICK.AC.UK.ORCID http://orcid.org/0000-0003-3199-0337
The Francis Crick Institute · GBCentre National de la Recherche Scientifique · FR

Funding

Cancer Research UK FC001092Medical Research Council FC001092Wellcome Trust FC001092
6 · The paper itself

Abstract

Autophagy is a cellular innate-immune defence mechanism against intracellular microorganisms, including Mycobacterium tuberculosis (Mtb). How canonical and non-canonical autophagy function to control Mtb infection in phagosomes and the cytosol remains unresolved. Macrophages are the main host cell in humans for Mtb. Here we studied the contributions of canonical and non-canonical autophagy in the genetically tractable human induced pluripotent stem cell-derived macrophages (iPSDM), using a set of Mtb mutants generated in the same genetic background of the common lab strain H37Rv. We monitored replication of Mtb mutants that are either unable to trigger canonical autophagy (Mtb ΔesxBA) or reportedly unable to block non-canonical autophagy (Mtb ΔcpsA) in iPSDM lacking either ATG7 or ATG14 using single-cell high-content imaging. We report that deletion of ATG7 by CRISPR-Cas9 in iPSDM resulted in increased replication of wild-type Mtb but not of Mtb ΔesxBA or Mtb ΔcpsA. We show that deletion of ATG14 resulted in increased replication of both Mtb wild type and the mutant Mtb ΔesxBA. Using Mtb reporters and quantitative imaging, we identified a role for ATG14 in regulating fusion of phagosomes containing Mtb with lysosomes, thereby enabling intracellular bacteria restriction. We conclude that ATG7 and ATG14 are both required for restricting Mtb replication in human macrophages.

Indexed as

Induced Pluripotent Stem CellsMycobacterium tuberculosisAdaptor Proteins, Vesicular TransportAutophagy-Related Protein 7Autophagy-Related ProteinsCytosolHumansMacrophagesPhagosomesAdaptor Proteins, Vesicular TransportATG14 protein, humanATG7 protein, humanAutophagy-Related Protein 7Autophagy-Related Proteins

Identifiers

PMID36959508
PMCPMC10159855
OpenAlexW4360610698

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.