Evidence map›Paper›PMID 36959168›Full record

ArticleNature communications2023

Two gates mediate NMDA receptor activity and are under subunit-specific regulation.

Johansen B Amin, Miaomiao He, Ramesh Prasad, Xiaoling Leng, Huan-Xiang Zhou, Lonnie P Wollmuth

Open access · goldFull text read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Temperature Sensitive Glutamate Gating of AMPA-subtype iGluRs.bioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. The open gate of the AMPA receptor forms a CaNature structural & molecular biology · 2024
    Article
  14. Structural insights into NMDA receptor pharmacology.Biochemical Society transactions · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Johansen B Amin *Graduate Program in Cellular and Molecular Pharmacology, Stony Brook University, Stony Brook, NY, 11794-5230, USA.
Miaomiao He *Graduate Program in Biochemistry and Structural Biology, Stony Brook University, Stony Brook, NY, 11794-5230, USA.ORCID 0000-0002-0317-9136
Ramesh PrasadDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL, 60607, USA.ORCID 0000-0001-9184-779X
Xiaoling LengDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL, 60607, USA.ORCID 0000-0002-9109-553X
Huan-Xiang ZhouDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL, 60607, USA.ORCID 0000-0001-9020-0302
Lonnie P WollmuthCenter for Nervous System Disorders, Stony Brook University, Stony Brook, NY, 11794-5230, USA. lonnie.wollmuth@stonybrook.edu.ORCID 0000-0002-8179-1259
Stony Brook University · USUniversity of Illinois Chicago · US

Funding

Minority Supplement for Noele CertainR01NS088479 · NINDS · STATE UNIVERSITY NEW YORK STONY BROOK · PI WOLLMUTH, LONNIE P · 2015 to 2023
$3.9M
NINDS NIH HHS R01 NS088479
6 · The paper itself

Abstract

Kinetics of NMDA receptor (NMDAR) ion channel opening and closing contribute to their unique role in synaptic signaling. Agonist binding generates free energy to open a canonical gate at the M3 helix bundle crossing. Single channel activity is characterized by clusters, or periods of rapid opening and closing, that are separated by long silent periods. A conserved glycine in the outer most transmembrane helices, the M4 helices, regulates NMDAR function. Here we find that the GluN1 glycine mainly regulates single channel events within a cluster, whereas the GluN2 glycine mainly regulates entry and exit from clusters. Molecular dynamics simulations suggest that, whereas the GluN2 M4 (along with GluN2 pre-M1) regulates the gate at the M3 helix bundle crossing, the GluN1 glycine regulates a 'gate' at the M2 loop. Subsequent functional experiments support this interpretation. Thus, the distinct kinetics of NMDARs are mediated by two gates that are under subunit-specific regulation.

Indexed as

N-MethylaspartateReceptors, N-Methyl-D-AspartateGlycineIon Channel GatingMolecular Dynamics SimulationGlycineN-MethylaspartateReceptors, N-Methyl-D-Aspartate

Identifiers

PMID36959168
PMCPMC10036335
OpenAlexW4360610005

What OpenQuestion holds

Textfull text, public
LicenceCC BY
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.