Evidence map›Paper›PMID 36952129›Full record

ArticleCellular and molecular life sciences : CMLS2023

Restriction of access to the central cavity is a major contributor to substrate selectivity in plant ABCG transporters.

Konrad Pakuła, Carlos Sequeiros-Borja, Wanda Biała-Leonhard, Aleksandra Pawela, Joanna Banasiak, Aurélien Bailly, Marcin Radom, Markus Geisler, Jan Brezovsky, Michał Jasiński

Open access · hybridFull text read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. ABA importers ABCG17 and ABCG18 redundantly regulate seed size in Arabidopsis.The Plant journal : for cell and molecular biology · 2025
    Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Konrad Pakuła *Department of Plant Molecular Physiology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z. Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0003-4189-1981
Carlos Sequeiros-Borja *Laboratory of Biomolecular Interactions and Transport, Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Uniwersytetu Poznanskiego 6, 61-614, Poznan, Poland.ORCID http://orcid.org/0000-0002-7817-0240
Wanda Biała-Leonhard *Department of Plant Molecular Physiology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z. Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0001-8594-2846
Aleksandra PawelaDepartment of Plant Molecular Physiology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z. Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0001-5017-4912
Joanna BanasiakDepartment of Plant Molecular Physiology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z. Noskowskiego 12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0002-2834-7116
Aurélien BaillyDepartment of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, 8008, Zurich, Switzerland.ORCID http://orcid.org/0000-0001-5546-1945
Marcin RadomDepartment of Structural Bioinformatics, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z.Noskowskiego12/14, 61-704, Poznan, Poland.ORCID http://orcid.org/0000-0002-4174-7069
Markus GeislerDepartment of Biology, University of Fribourg, Chem. du Musée 10, 1700, Fribourg, Switzerland.ORCID http://orcid.org/0000-0002-6641-5810
Jan BrezovskyLaboratory of Biomolecular Interactions and Transport, Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Uniwersytetu Poznanskiego 6, 61-614, Poznan, Poland. janbre@amu.edu.pl.ORCID http://orcid.org/0000-0001-9677-5078
Michał JasińskiDepartment of Plant Molecular Physiology, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z. Noskowskiego 12/14, 61-704, Poznan, Poland. jasinski@ibch.poznan.pl.ORCID http://orcid.org/0000-0003-0904-5873
Institute of Bioorganic Chemistry, Polish Academy of Sciences · PLInternational Institute of Molecular and Cell Biology · PLUniversity of Fribourg · CHUniversity of Zurich · CH

Funding

Narodowe Centrum Badań i Rozwoju POWR.03.02.00-00-1032/16Narodowe Centrum Badań i Rozwoju POWR.03.02.00-00-I022/16Narodowe Centrum Nauki 2017/25/B/NZ1/01307Narodowe Centrum Nauki 2017/27/B/NZ1/01090
6 · The paper itself

Abstract

ABCG46 of the legume Medicago truncatula is an ABC-type transporter responsible for highly selective translocation of the phenylpropanoids, 4-coumarate, and liquiritigenin, over the plasma membrane. To investigate molecular determinants of the observed substrate selectivity, we applied a combination of phylogenetic and biochemical analyses, AlphaFold2 structure prediction, molecular dynamics simulations, and mutagenesis. We discovered an unusually narrow transient access path to the central cavity of MtABCG46 that constitutes an initial filter responsible for the selective translocation of phenylpropanoids through a lipid bilayer. Furthermore, we identified remote residue F562 as pivotal for maintaining the stability of this filter. The determination of individual amino acids that impact the selective transport of specialized metabolites may provide new opportunities associated with ABCGs being of interest, in many biological scenarios.

Indexed as

ATP-Binding Cassette TransportersMolecular Dynamics SimulationATP Binding Cassette Transporter, Subfamily GMutagenesisPhylogenyATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily GABC transportersAccess pathAlphaFold2PhenylpropanoidsSelectivity

Identifiers

PMID36952129
PMCPMC10036432
OpenAlexW4360600047

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read36
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.