Evidence map›Paper›PMID 36952035›Full record

ArticleHuman genetics2024

Five years of experience in the Epigenetics and Chromatin Clinic: what have we learned and where do we go from here?

Jacqueline R Harris, Christine W Gao, Jacquelyn F Britton, Carolyn D Applegate, Hans T Bjornsson, Jill A Fahrner

Open access · hybridAbstract read
In one paragraph

Article in Human genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
10.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
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  4. Article
  5. Keeping up the beat of Kleefstra syndrome.Italian journal of pediatrics · 2026
    Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Expanding Upon Genomics in Rare Diseases: Epigenomic Insights.International journal of molecular sciences · 2024
    Review
  13. Epigenetics and the timing of neuronal differentiation.Current opinion in neurobiology · 2024
    Review
  14. Article
  15. Article
  16. Review
  17. Attention challenges in Kabuki syndrome.Journal of intellectual disability research : JIDR · 2024
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jacqueline R HarrisDepartment of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Christine W GaoDepartment of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Jacquelyn F BrittonDepartment of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Carolyn D ApplegateDepartment of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Hans T BjornssonDepartment of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Jill A FahrnerDepartment of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA. jfahrne1@jhmi.edu.ORCID http://orcid.org/0000-0001-5506-8780
Johns Hopkins University · USKennedy Krieger Institute · USReykjavík University · IS

Funding

Medical Scientist Training ProgramT32GM136577 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ANDREA L COX · 2020 to 2026
$13.4M
Exploring Disrupted H3K27me3 in Mendelian Disorders of the Epigenetic Machinery and Restoring Its Balance as a Therapeutic Approach to Treat Abnormal GrowthK08HD086250 · NICHD · JOHNS HOPKINS UNIVERSITY · PI FAHRNER, JILL A · 2018 to 2023
$966k
Preparing for a Clinical Trial in Kabuki Syndrome- Characterization of Cognitive and Neuroanatomical Features and Pilot Treatment TrialK23HD101646 · NICHD · HUGO W. MOSER RES INST KENNEDY KRIEGER · PI HARRIS, JACQUELINE · 2020 to 2024
$843k
NICHD NIH HHS K08 HD086250NICHD NIH HHS K23 HD101646NIGMS NIH HHS T32 GM136577
6 · The paper itself

Abstract

The multidisciplinary Epigenetics and Chromatin Clinic at Johns Hopkins provides comprehensive medical care for individuals with rare disorders that involve disrupted epigenetics. Initially centered on classical imprinting disorders, the focus shifted to the rapidly emerging group of genetic disorders resulting from pathogenic germline variants in epigenetic machinery genes. These are collectively called the Mendelian disorders of the epigenetic machinery (MDEMs), or more broadly, Chromatinopathies. In five years, 741 clinic visits have been completed for 432 individual patients, with 153 having confirmed epigenetic diagnoses. Of these, 115 individuals have one of 26 MDEMs with every single one exhibiting global developmental delay and/or intellectual disability. This supports prior observations that intellectual disability is the most common phenotypic feature of MDEMs. Additional common phenotypes in our clinic include growth abnormalities and neurodevelopmental issues, particularly hypotonia, attention-deficit/hyperactivity disorder (ADHD), and anxiety, with seizures and autism being less common. Overall, our patient population is representative of the broader group of MDEMs and includes mostly autosomal dominant disorders impacting writers more so than erasers, readers, and remodelers of chromatin marks. There is an increased representation of dual function components with a reader and an enzymatic domain. As expected, diagnoses were made mostly by sequencing but were aided in some cases by DNA methylation profiling. Our clinic has helped to facilitate the discovery of two new disorders, and our providers are actively developing and implementing novel therapeutic strategies for MDEMs. These data and our high follow-up rate of over 60% suggest that we are achieving our mission to diagnose, learn from, and provide optimal care for our patients with disrupted epigenetics.

Indexed as

ChromatinDNA MethylationEpigenesis, GeneticAdolescentAdultChildChild, PreschoolDevelopmental DisabilitiesEpigenomicsFemaleGenetic Diseases, InbornHumansInfantIntellectual DisabilityMalePhenotypeChromatin

Identifiers

PMID36952035
PMCPMC10034257
OpenAlexW4360599787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.