Evidence map›Paper›PMID 36951916›Full record

ArticleMicrobial genomics2023

Global population structure, genomic diversity and carbohydrate fermentation characteristics of clonal complex 119 (CC119), an understudied Shiga toxin-producing

Keiji Nakamura, Kazuko Seto, Kenichi Lee, Tadasuke Ooka, Yasuhiro Gotoh, Itsuki Taniguchi, Yoshitoshi Ogura, Jacques Georges Mainil, Denis Piérard, Tetsuya Harada and 10 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microbial genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Closed genome sequences of 39 Shiga toxin-producingMicrobiology resource announcements · 2025
    Article
  4. Emerging hybrid shigatoxigenic and enteropathogenicClinical microbiology reviews · 2025
    Review
  5. Article
  6. Diversity of Shiga toxin transducing phages inFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 2 countries.

Keiji NakamuraGraduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Kazuko SetoOsaka Institute of Public Health, Osaka, Japan.
Kenichi LeeNational Institute of Infectious Diseases, Tokyo, Japan.
Tadasuke OokaGraduate School of Medical and Dental Sciences, Kagoshima University, Kagoshima, Japan.
Yasuhiro GotohGraduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Itsuki TaniguchiGraduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Yoshitoshi OguraKurume University School of Medicine, Fukuoka, Japan.
Jacques Georges MainilFaculty of Veterinary Medicine, University of Liege, Liege, Belgium.
Denis PiérardUniversitair Ziekenhuis Brussel (UZ Brussel), Vrije Universiteit Brussel (VUB), Brussels, Belgium.
Tetsuya HaradaOsaka Institute of Public Health, Osaka, Japan.
Yoshiki EtohFukuoka Institute of Health and Environmental Sciences, Fukuoka, Japan.
Saori UedaFukuoka Institute of Health and Environmental Sciences, Fukuoka, Japan.
Mitsuhiro HamasakiFukuoka Institute of Health and Environmental Sciences, Fukuoka, Japan.
Junko IsobeToyama Institute of Health, Toyama, Japan.
Keiko KimataToyama Institute of Health, Toyama, Japan.
Hiroshi NarimatsuOita Prefectural Institute of Health and Environment, Oita, Japan.
Jun YatsuyanagiAkita Prefectural Institute of Public Health, Akita, Japan.
Makoto OhnishiPresent address: Chūbu Regional Public Health Center, Okinawa, Japan.
Sunao IyodaNational Institute of Infectious Diseases, Tokyo, Japan.
Tetsuya HayashiGraduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Kyushu University · JPFukuoka Institute of Health and Environmental Sciences · JPNational Institute of Infectious Diseases · JPOsaka Prefectural Institute of Public Health · JPToyama Institute of Health · JPAkita Prefectural Akita High School · JPKagoshima University · JPKurume University · JPUniversity of Liège · BEVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among Shiga toxin (Stx)-producing

Indexed as

Escherichia coli ProteinsShiga-Toxigenic Escherichia coliCarbohydratesFermentationGenomicsHumansShiga ToxinTelluriumCarbohydratesEscherichia coli ProteinsShiga ToxinTelluriumtellurous acidcarbohydrate fermentationcomparative genomicsO165:H25O172:H25phylogenetic analysisShiga toxin-producing Escherichia coli

Identifiers

PMID36951916
PMCPMC10132054
OpenAlexW4360601101

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.