Evidence map›Paper›PMID 36951900›Full record

ArticleMicrobial genomics2023

Advantages of analysing both pairwise SNV-distance and differing SNVs between

Darja Sadovska, Anda Nodieva, Ilva Pole, Jānis Ķimsis, Anda Vīksna, Iveta Ozere, Inga Norvaiša, Dace Bandere, Renāte Ranka

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. ClinicalFrontiers in microbiology · 2025
    Pooled it
  2. TheFrontiers in medicine · 2026
    Article
  3. Article
  4. Endogenous reactivation cases identified by whole genome sequencing ofJournal of clinical tuberculosis and other mycobacterial diseases · 2024
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Darja SadovskaLatvian Biomedical Research and Study Centre, Riga, Latvia.
Anda NodievaRiga East Clinical University Hospital, Centre of Tuberculosis and Lung Diseases, Stopiņi Region, Upeslejas, Latvia.
Ilva PoleLatvian Biomedical Research and Study Centre, Riga, Latvia.
Jānis ĶimsisLatvian Biomedical Research and Study Centre, Riga, Latvia.
Anda VīksnaRiga East Clinical University Hospital, Centre of Tuberculosis and Lung Diseases, Stopiņi Region, Upeslejas, Latvia.
Iveta OzereRiga East Clinical University Hospital, Centre of Tuberculosis and Lung Diseases, Stopiņi Region, Upeslejas, Latvia.
Inga NorvaišaRiga East Clinical University Hospital, Centre of Tuberculosis and Lung Diseases, Stopiņi Region, Upeslejas, Latvia.
Dace BandereDepartment of Pharmaceutical Chemistry, Rīga Stradiņš University, Riga, Latvia.
Renāte RankaLatvian Biomedical Research and Study Centre, Riga, Latvia.
Latvian Biomedical Research and Study Centre · LVRiga East University Hospital · LVRiga Stradiņš University · LV

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endogenous reactivation and exogenous reinfection are two possible causes of recurrent tuberculosis (TB). However, in some cases, precise cause determination can be challenging. In this study, we used whole genome sequencing to determine pairwise SNV distances and detect differing SNVs in initial and subsequent isolates for recurrent TB cases when the first and second episodes were caused by

Indexed as

Mycobacterium tuberculosisTuberculosisAntitubercular AgentsHumansReinfectionWhole Genome SequencingAntitubercular Agentsreactivationrecurrencereinfectiontuberculosiswhole genome sequencing

Identifiers

PMID36951900
PMCPMC10132068
OpenAlexW4360599890

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.