Evidence map›Paper›PMID 36950387›Full record

ArticleCell genomics2023

Anja Fischer, Robert Lersch, Niklas de Andrade Krätzig, Alexander Strong, Mathias J Friedrich, Julia Weber, Thomas Engleitner, Rupert Öllinger, Hsi-Yu Yen, Ursula Kohlhofer and 26 more

Open access · goldFull text read
In one paragraph

Article in Cell genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 11 institutions in 5 countries.

Anja FischerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Robert LerschInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Niklas de Andrade KrätzigInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Alexander StrongThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, UK.
Mathias J FriedrichInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Julia WeberInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Thomas EngleitnerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Rupert ÖllingerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Hsi-Yu YenGerman Cancer Consortium (DKTK), Heidelberg, Germany.
Ursula KohlhoferInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany.
Irene Gonzalez-MenendezInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany.
David SailerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Liz KoganInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Mari LahnalampiInstitute of Biomedicine, School of Medicine, University of Eastern Finland, Kuopio, Finland.
Saara LaukkanenFaculty of Medicine and Health Technology, Tampere Center for Child, Adolescent and Maternal Health Research and Tays Cancer Center, Tampere University, Tampere, Finland.
Thorsten KaltenbacherInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Christine KlementInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Majdaddin RezaeiInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Tim AmmonCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technische Universität München, 81675 Munich, Germany.
Juan J MonteroInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Günter SchneiderDepartment of Medicine II, Klinikum rechts der Isar, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Julia MayerleMedical Department II, University Hospital, LMU Munich, Munich, Germany.
Mathias HeikenwälderGerman Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.
Marc Schmidt-SupprianCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technische Universität München, 81675 Munich, Germany.
Leticia Quintanilla-MartinezInstitute of Pathology and Comprehensive Cancer Center, Eberhard Karls Universität Tübingen, 72076 Tübingen, Germany.
Katja SteigerGerman Cancer Consortium (DKTK), Heidelberg, Germany.
Pentao LiuThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, UK.
Juan CadiñanosInstituto de Medicina Oncológica y Molecular de Asturias (IMOMA), 33193 Oviedo, Spain.
George S VassiliouThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, UK.
Dieter SaurCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technische Universität München, 81675 Munich, Germany.
Olli LohiFaculty of Medicine and Health Technology, Tampere Center for Child, Adolescent and Maternal Health Research and Tays Cancer Center, Tampere University, Tampere, Finland.
Merja HeinäniemiInstitute of Biomedicine, School of Medicine, University of Eastern Finland, Kuopio, Finland.
Nathalie ConteThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, UK.
Allan BradleyThe Wellcome Trust Sanger Institute, Genome Campus, Hinxton, Cambridge, UK.
Lena RadCenter for Translational Cancer Research (TranslaTUM), School of Medicine, Technische Universität München, 81675 Munich, Germany.
Roland RadInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, 81675 Munich, Germany.
Technical University of Munich · DEGerman Cancer Research Center · DETUM Klinikum · DEUniversity of Tübingen · DEWellcome Sanger Institute · GBTampere University · FIUniversity of Eastern Finland · FIInstituto de Medicina Genómica · ESLMU Klinikum · DEUniversity of Cambridge · GBWellcome/MRC Cambridge Stem Cell Institute · GB

Funding

Cancer Research UK 23015Medical Research Council MC_PC_17230
6 · The paper itself

Abstract

In contrast to mono- or biallelic loss of tumor-suppressor function, effects of discrete gene dysregulations, as caused by non-coding (epi)genome alterations, are poorly understood. Here, by perturbing the regulatory genome in mice, we uncover pervasive roles of subtle gene expression variation in cancer evolution. Genome-wide screens characterizing 1,450 tumors revealed that such quasi-insufficiency is extensive across entities and displays diverse context dependencies, such as distinct cell-of-origin associations in T-ALL subtypes. We compile catalogs of non-coding regions linked to quasi-insufficiency, show their enrichment with human cancer risk variants, and provide functional insights by engineering regulatory alterations in mice. As such, kilo-/megabase deletions in a

Indexed as

Bcl11bcancer evolutiongenetic screeninggenomicsleukemialymphomamousenon-coding genomePiggyBacquasi-insufficiency

Identifiers

PMID36950387
PMCPMC10025556
OpenAlexW4323543645

What OpenQuestion holds

Textfull text, public
LicenceCC BY
reference markers read1
measurements read76
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.