Evidence map›Paper›PMID 36945541›Full record

ArticlebioRxiv : the preprint server for biology2023

Host interactions of novel

Bhavya Papudeshi, Alejandro A Vega, Cole Souza, Sarah K Giles, Vijini Mallawaarachchi, Michael J Roach, Michelle An, Nicole Jacobson, Katelyn McNair, Maria Fernanda Mora and 15 more

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors at 5 institutions in 3 countries.

Bhavya PapudeshiFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Alejandro A VegaDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Cole SouzaDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Sarah K GilesFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Vijini MallawaarachchiFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Michael J RoachFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Michelle AnDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Nicole JacobsonDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Katelyn McNairComputational Science Research Center, San Diego State University, 5500 Campanile Drive, San Diego, CA, 992182, USA.
Maria Fernanda MoraDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Karina PastranaDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Lance BolingDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Christopher LeighAdelaide Microscopy, University of Adelaide, Adelaide, SA, 5005, Australia.
Clarice HarkerFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Will S PlewaFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Susanna R GrigsonFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
George BourasAdelaide Medical School, Faculty of Health and Medical Sciences, The University of Adelaide, Adelaide, SA, 5005, Australia.
Przemysław DecewiczDepartment of Environmental Microbiology and Biotechnology, Institute of Microbiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, Warsaw, 02-096, Poland.
Antoni LuqueDepartment of Mathematics and Statistics, San Diego State University, 5500 Campanile Drive, San Diego, CA, 992182, USA.
Lindsay DroitDepartment of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Scott A HandleyDepartment of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, 63110, USA.
David WangDepartment of Pathology & Immunology, Washington University School of Medicine, St. Louis, MO, 63110, USA.
Anca M SegallDepartment of Biology, San Diego State University, 5500 Campanile Drive, San Diego, CA, 92182, USA.
Elizabeth A DinsdaleFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Robert A EdwardsFlinders Accelerator for Microbiome Exploration, College of Science and Engineering, Flinders University, Bedford Park, Adelaide, SA, 5042, Australia.
Flinders University · AUSan Diego State University · USWashington University in St. Louis · USThe University of Adelaide · AUUniversity of California, Los Angeles · US

Funding

Computational and Experimental Resources for Virome Analysis in Inflammatory Bowel Disease (CERVAID)RC2DK116713 · NIDDK · WASHINGTON UNIVERSITY · PI WANG, DAVID · 2019 to 2023
$8.9M
NIDDK NIH HHS RC2 DK116713
6 · The paper itself

Abstract

Bacteroides, the prominent bacteria in the human gut, play a crucial role in degrading complex polysaccharides. Their abundance is influenced by phages belonging to the Impact statement: Bacteriophages play a crucial role in shaping microbial communities within the human gut. Among the most dominant bacteriophages in the human gut microbiome are Data summary: The genomes used in this research are available on Sequence Read Archive (SRA) within the project, PRJNA737576.

Identifiers

PMID36945541
PMCPMC10028833
OpenAlexW4323660551

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.