Evidence map›Paper›PMID 36945526›Full record

ArticleResearch square2023

MicroMagnify: a multiplexed expansion microscopy method for pathogens and infected tissues.

Yongxin Zhao, Zhangyu Cheng, Caroline Stefani, Thomas Skillman, Aleksandra Klimas, Aramchan Lee, Emma DiBernardo, Karina Mueller Brown, Tatyana Milman, Brendan Gallagher and 7 more

Open access · greenFull text readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Yongxin ZhaoCarnegie Mellon University.ORCID 0000-0003-4188-5725
Zhangyu ChengCarnegie Mellon University.ORCID 0000-0002-6131-1414
Caroline StefaniBenaroya Research Institute.ORCID 0000-0003-3420-432X
Thomas SkillmanImmersive Science LLC.
Aleksandra KlimasCarnegie Mellon University.
Aramchan LeeCarnegie Mellon University.
Emma DiBernardoCarnegie Mellon University.
Karina Mueller BrownCarnegie Mellon University.ORCID 0000-0001-5310-9876
Tatyana MilmanWills Eye Hospital and Jefferson University Hospital.
Brendan GallagherCarnegie Mellon University.
Katherine LagreeCarnegie Mellon University.
Bhanu JenaWayne State University School of Medicine.ORCID 0000-0002-6030-8766
Jose PulidoWills Eye Hospital and Jefferson University Hospital.
Scott FillerLundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center.
Aaron MitchellUniversity of Georgia.
Luisa HillerCarnegie Mellon University.
Adam Lacy-HulbertBenaroya Research Institute at Virginia Mason.
Carnegie Mellon University · USBenaroya Research InstituteWills Eye Hospital · USHarbor–UCLA Medical Center · USWayne State University · US

Funding

C. albicans invasion and proliferation during oral infectionR01DE026600 · NIDCR · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI FILLER, SCOTT G, MITCHELL, AARON P · 2017 to 2021
$3.0M
NIDCR NIH HHS R01 DE026600
6 · The paper itself

Abstract

Super-resolution optical imaging tools are crucial in microbiology to understand the complex structures and behavior of microorganisms such as bacteria, fungi, and viruses. However, the capabilities of these tools, particularly when it comes to imaging pathogens and infected tissues, remain limited. We developed µMagnify, a nanoscale multiplexed imaging method for pathogens and infected tissues that are derived from an expansion microscopy technique with a universal biomolecular anchor. We formulated an enzyme cocktail specifically designed for robust cell wall digestion and expansion of microbial cells without distortion while efficiently retaining biomolecules suitable for high-plex fluorescence imaging with nanoscale precision. Additionally, we developed an associated virtual reality tool to facilitate the visualization and navigation of complex three-dimensional images generated by this method in an immersive environment allowing collaborative exploration among researchers around the world. µMagnify is a valuable imaging platform for studying how microbes interact with their host systems and enables development of new diagnosis strategies against infectious diseases.

Identifiers

PMID36945526
PMCPMC10029075
OpenAlexW4323310861

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read95
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.