Evidence map›Paper›PMID 36945454›Full record

ArticlebioRxiv : the preprint server for biology2023

Antibody-directed extracellular proximity biotinylation reveals Contactin-1 regulates axo-axonic innervation of axon initial segments.

Yuki Ogawa, Brian C Lim, Shanu George, Juan A Oses-Prieto, Joshua M Rasband, Yael Eshed-Eisenbach, Supna Nair, Francesco Boato, Elior Peles, Alma L Burlingame and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Yuki OgawaBaylor College of Medicine, Department of Neuroscience, Houston, TX, USA.
Brian C LimBaylor College of Medicine, Department of Neuroscience, Houston, TX, USA.
Shanu GeorgeCold Spring Harbor Laboratory, Division of Neuroscience, Cold Spring Harbor, NY, USA.
Juan A Oses-PrietoUniversity of California San Francisco, Department of Pharmaceutical Chemistry, San Francisco, CA, USA.
Joshua M RasbandBaylor College of Medicine, Department of Neuroscience, Houston, TX, USA.
Yael Eshed-EisenbachWeizmann Institute of Science, Department of Molecular Cell Biology, Rehovot, Israel.
Supna NairUniversity of California San Francisco, Department of Pharmaceutical Chemistry, San Francisco, CA, USA.
Francesco BoatoCold Spring Harbor Laboratory, Division of Neuroscience, Cold Spring Harbor, NY, USA.
Elior PelesWeizmann Institute of Science, Department of Molecular Cell Biology, Rehovot, Israel.
Alma L BurlingameUniversity of California San Francisco, Department of Pharmaceutical Chemistry, San Francisco, CA, USA.
Linda Van AelstCold Spring Harbor Laboratory, Division of Neuroscience, Cold Spring Harbor, NY, USA.
Matthew N RasbandBaylor College of Medicine, Department of Neuroscience, Houston, TX, USA.

Funding

The Molecular Architecture of Axons in Health and DiseaseR35NS122073 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI MATTHEW N RASBAND · 2021 to 2026
$5.6M
Molecular and cellular mechanisms governing interneuron development and connectivityR01MH119819 · NIMH · COLD SPRING HARBOR LABORATORY · PI VAN AELST, LINDA · 2019 to 2023
$3.3M
Neurodevelopmental Disorder-Associated Rho Regulators in Neocortical DevelopmentR01NS116897 · NINDS · COLD SPRING HARBOR LABORATORY · PI VAN AELST, LINDA · 2020 to 2024
$2.9M
NIMH NIH HHS R01 MH119819NINDS NIH HHS R01 NS116897NINDS NIH HHS R35 NS122073
6 · The paper itself

Abstract

Axon initial segment (AIS) cell surface proteins mediate key biological processes in neurons including action potential initiation and axo-axonic synapse formation. However, few AIS cell surface proteins have been identified. Here, we used antibody-directed proximity biotinylation to define the cell surface proteins in close proximity to the AIS cell adhesion molecule Neurofascin. To determine the distributions of the identified proteins, we used CRISPR-mediated genome editing for insertion of epitope tags in the endogenous proteins. We found Contactin-1 (Cntn1) among the previously unknown AIS proteins we identified. Cntn1 is enriched at the AIS through interactions with Neurofascin and NrCAM. We further show that Cntn1 contributes to assembly of the AIS-extracellular matrix, and is required for AIS axo-axonic innervation by inhibitory basket cells in the cerebellum and inhibitory chandelier cells in the cortex.

Identifiers

PMID36945454
PMCPMC10028829

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.