Evidence map›Paper›PMID 36945116›Full record

ArticleGut microbes

Shorter sleep time relates to lower human defensin 5 secretion and compositional disturbance of the intestinal microbiota accompanied by decreased short-chain fatty acid production.

Yu Shimizu, Ryodai Yamamura, Yuki Yokoi, Tokiyoshi Ayabe, Shigekazu Ukawa, Koshi Nakamura, Emiko Okada, Akihiro Imae, Takafumi Nakagawa, Akiko Tamakoshi and 1 more

Open access · goldFull text read
In one paragraph

Article in Gut microbes. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

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  17. Increased relative abundance ofFrontiers in sleep · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yu ShimizuDepartment of Cell Biological Science, Faculty of Advanced Life Science, Hokkaido University, Hokkaido, Japan.ORCID 0000-0002-5439-7678
Ryodai YamamuraDivision of Biomedical Oncology, Institute for Genetic Medicine, Hokkaido University, Hokkaido, Japan.ORCID 0000-0002-9342-7702
Yuki YokoiDepartment of Cell Biological Science, Faculty of Advanced Life Science, Hokkaido University, Hokkaido, Japan.ORCID 0000-0002-8077-3200
Tokiyoshi AyabeDepartment of Cell Biological Science, Faculty of Advanced Life Science, Hokkaido University, Hokkaido, Japan.ORCID 0000-0002-8631-5593
Shigekazu UkawaDepartment of Social Welfare Science and Clinical Psychology, Osaka Metropolitan University Graduate School of Human Life and Ecology, Osaka, Japan.ORCID 0000-0003-4084-1720
Koshi NakamuraDepartment of Public Health and Hygiene, Graduate School of Medicine, University of the Ryukyus, Okinawa, Japan.ORCID 0000-0001-8141-7614
Emiko OkadaDepartment of Nutritional Epidemiology and Shokuiku, National Institute of Biomedical Innovation, Health and Nutrition, Tokyo, Japan.ORCID 0000-0002-9345-0937
Akihiro ImaeSuttu Municipal Clinic, Hokkaido, Japan.
Takafumi NakagawaThe Centre for Family Medicine, Hokkaido, Japan.
Akiko TamakoshiDepartment of Public Health, Faculty of Medicine, Hokkaido University, Hokkaido, Japan.ORCID 0000-0002-9761-3879
Kiminori NakamuraDepartment of Cell Biological Science, Faculty of Advanced Life Science, Hokkaido University, Hokkaido, Japan.ORCID 0000-0002-2138-1733
Hokkaido University · JPNational Institute of Biomedical Innovation, Health and Nutrition · JPOsaka Metropolitan University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sleep is essential for our health. Short sleep is known to increase disease risks via imbalance of intestinal microbiota, dysbiosis. However, mechanisms by which short sleep induces dysbiosis remain unknown. Small intestinal Paneth cell regulates the intestinal microbiota by secreting antimicrobial peptides including α-defensin, human defensin 5 (HD5). Disruption of circadian rhythm mediating sleep-wake cycle induces Paneth cell failure. We aim to clarify effects of short sleep on HD5 secretion and the intestinal microbiota. Fecal samples and self-reported sleep time were obtained from 35 healthy middle-aged Japanese (41 to 60-year-old). Shorter sleep time was associated with lower fecal HD5 concentration (

Indexed as

Gastrointestinal MicrobiomeAdultDefensinsDysbiosisFatty Acids, VolatileHumansMiddle AgedSleepDefensinsFatty Acids, VolatileIntestinal microbiotaPaneth cellShort-chain fatty acidShort sleepSleep disorderα-defensin

Identifiers

PMID36945116
PMCPMC10038026
OpenAlexW4353020753

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read20
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.