Evidence map›Paper›PMID 36944944›Full record

ArticleJournal of translational medicine2023

Immune profiling and prognostic model of pancreatic cancer using quantitative pathology and single-cell RNA sequencing.

Kai Chen, Qi Wang, Xinxin Liu, Xiaodong Tian, Aimei Dong, Yinmo Yang

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Article in Journal of translational medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kai ChenDepartment of General Surgery, Peking University First Hospital, 8th Xishiku Street, Beijing, 100034, China.
Qi WangDepartment of General Surgery, Peking University First Hospital, 8th Xishiku Street, Beijing, 100034, China.
Xinxin LiuDepartment of General Surgery, Peking University First Hospital, 8th Xishiku Street, Beijing, 100034, China.
Xiaodong TianDepartment of General Surgery, Peking University First Hospital, 8th Xishiku Street, Beijing, 100034, China. tianxiaodong@pkufh.com.ORCID 0000-0002-0943-5161
Aimei DongDepartment of Endocrinology, Peking University First Hospital, 8th Xishiku Street, Beijing, 100034, China. dongaimei@pkufh.com.
Yinmo YangDepartment of General Surgery, Peking University First Hospital, 8th Xishiku Street, Beijing, 100034, China. YangyinmoSCI@bjmu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPancreatic ductal adenocarcinoma (PDAC) has a complex tumor immune microenvironment (TIME), the clinical value of which remains elusive. This study aimed to delineate the immune landscape of PDAC and determine the clinical value of immune features in TIME.

methodsUnivariable and multivariable Cox regression analyses were performed to evaluate the clinical value of immune features and establish a new prognostic model. We also conducted single-cell RNA sequencing (scRNA-seq) to further characterize the immune profiles of PDAC and explore cell-to-cell interactions.

resultsThere was a significant difference in the immune profiles between PDAC and adjacent noncancerous tissues. Several novel immune features were captured by quantitative pathological analysis on multiplex immunohistochemistry (mIHC), some of which were significantly correlated with the prognosis of patients with PDAC. A risk score-based prognostic model was established based on these immune features. We also constructed a user-friendly nomogram plot to predict the overall survival (OS) of patients by combining the risk score and clinicopathological features. Both mIHC and scRNA-seq analysis revealed PD-L1 expression was low in PDAC. We found that PD1 + cells were distributed in different T cell subpopulations, and were not enriched in a specific subpopulation. In addition, there were other conserved receptor-ligand pairs (CCL5-SDC1/4) besides the PD1-PD-L1 interaction between PD1 + T cells and PD-L1 + tumor cells.

conclusionOur findings reveal the immune landscape of PDAC and highlight the significant value of the combined application of mIHC and scRNA-seq for uncovering TIME, which might provide new clues for developing immunotherapy combination strategies.

Indexed as

Carcinoma, Pancreatic DuctalPancreatic NeoplasmsB7-H1 AntigenBiomarkers, TumorHumansKaplan-Meier EstimatePrognosisSequence Analysis, RNATumor MicroenvironmentB7-H1 AntigenBiomarkers, TumorImmune profilesPancreatic cancerPrognosisQuantitative pathologyscRNA-seq

Identifiers

PMID36944944
PMCPMC10031915

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.