Evidence map›Paper›PMID 36944911›Full record

ArticleBMC genomics2023

Genome-wide analysis of the GLP gene family and overexpression of GLP1-5-1 to promote lignin accumulation during early somatic embryo development in Dimocarpus longan.

Zhuoyun Li, Zhuoran Fu, Shuting Zhang, Xueying Zhang, Xiaodong Xue, Yukun Chen, Zihao Zhang, Zhongxiong Lai, Yuling Lin

Open access · goldFull text read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Genome Identification ofPlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zhuoyun Li *Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Zhuoran Fu *Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Shuting ZhangInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Xueying ZhangInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Xiaodong XueInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Yukun ChenInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Zihao ZhangInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
Zhongxiong LaiInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. laizx01@163.com.
Yuling LinInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China. buliang84@163.com.
Fujian Agriculture and Forestry University · CN

Funding

Constructions of Plateau Discipline of Fujian Province 102/71201801101National Natural Science Foundation of China 31672127Natural Science Foundation of Fujian Province 2020J01543Technology Innovation Fund of Fujian agriculture and forestry university CXZX2019033S and CXZX2018078
6 · The paper itself

Abstract

Longan (Dimocarpus longan Lour.) is an economically important subtropical fruit tree. Its fruit quality and yield are affected by embryo development. As a plant seed germination marker gene, the germin-like protein (GLP) gene plays an important role in embryo development. However, the mechanism underlying the role of the GLP gene in somatic embryos is still unclear. Therefore, we conducted genome-wide identification of the longan GLP (DlGLP) gene and preliminarily verified the function of DlGLP1-5-1. Thirty-five genes were identified as longan GLP genes and divided into 8 subfamilies. Based on transcriptome data and qRT‒PCR results, DlGLP genes exhibited the highest expression levels in the root, and the expression of most DlGLPs was upregulated during the early somatic embryogenesis (SE) in longan and responded to high temperature stress and 2,4-D treatment; eight DlGLP genes were upregulated under MeJA treatment, and four of them were downregulated under ABA treatment. Subcellular localization showed that DlGLP5-8-2 and DlGLP1-5-1 were located in the cytoplasm and extracellular stroma/chloroplast, respectively. Overexpression of DIGLP1-5-1 in the globular embryos (GEs) of longan promoted the accumulation of lignin and decreased the H

Indexed as

LigninSapindaceaeGene Expression ProfilingGlycoproteinsHydrogen PeroxidePlant ProteinsgerminGlycoproteinsHydrogen PeroxideLigninPlant ProteinsD. longanExpression patternGLP gene familyLigninSomatic embryogenesisSubcellular localization

Identifiers

PMID36944911
PMCPMC10029309
OpenAlexW4328100178

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read20
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.