Evidence map›Paper›PMID 36943470›Full record

ArticleVirchows Archiv : an international journal of pathology2023

A case of vasculogenic mesenchymal tumor in the mediastinum: whole-exome sequencing reveals origin from pre-existing germ cell tumor.

Hirotake Fujii, Yosuke Yamada, Kentaro Yamamura, Yoshihiro Ishida, Marina Tsujimura, Kazuhisa Matsumoto, Satona Tanaka, Hiroshi Date, Tadaaki Nishikawa, Yukihiro Yoshida and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Virchows Archiv : an international journal of pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Hirotake FujiiDepartment of Diagnostic Pathology, Kyoto University Hospital, 54 Shogoin Kawahara-Cho, Sakyo-Ku, Kyoto, 606-8507, Japan.
Yosuke YamadaDepartment of Diagnostic Pathology, Kyoto University Hospital, 54 Shogoin Kawahara-Cho, Sakyo-Ku, Kyoto, 606-8507, Japan. yyamada@kuhp.kyoto-u.ac.jp.ORCID http://orcid.org/0000-0001-7952-2706
Kentaro YamamuraDepartment of Dermatology, Kyoto University Hospital, Kyoto, Japan.
Yoshihiro IshidaDepartment of Dermatology, Kyoto University Hospital, Kyoto, Japan.
Marina TsujimuraDepartment of Diagnostic Pathology, Kyoto University Hospital, 54 Shogoin Kawahara-Cho, Sakyo-Ku, Kyoto, 606-8507, Japan.
Kazuhisa MatsumotoDepartment of Thoracic Surgery, Kyoto University Hospital, Kyoto, Japan.
Satona TanakaDepartment of Thoracic Surgery, Kyoto University Hospital, Kyoto, Japan.
Hiroshi DateDepartment of Thoracic Surgery, Kyoto University Hospital, Kyoto, Japan.
Tadaaki NishikawaDepartment of Medical Oncology, National Cancer Center Hospital, Tokyo, Japan.
Yukihiro YoshidaDepartment of Thoracic Surgery, National Cancer Center Hospital, Tokyo, Japan.
Jumpei KashimaDepartment of Diagnostic Pathology, National Cancer Center Hospital, Tokyo, Japan.
Yasushi YatabeDepartment of Diagnostic Pathology, National Cancer Center Hospital, Tokyo, Japan.
Seishi OgawaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Alexander MarxInstitute of Pathology, Mannheim and Medical Faculty Mannheim, University Medical Centre, Heidelberg University, Mannheim, Germany.
Thomas M UlbrightDepartment of Pathology, Indiana University School of Medicine, Indianapolis, IN, USA.
Hironori HagaDepartment of Diagnostic Pathology, Kyoto University Hospital, 54 Shogoin Kawahara-Cho, Sakyo-Ku, Kyoto, 606-8507, Japan.
Kyoto University Hospital · JPTokyo National Hospital · JPHeidelberg University · DEIndiana University School of MedicineKyoto University · JPNational Cancer Center Hospital East · JP

Funding

JSPS JP21K06902
6 · The paper itself

Abstract

Vasculogenic mesenchymal tumor (VMT), a primitive mesenchymal neoplasm enriched by various-sized atypical vessels, is a new entity that develops in mediastinal germ cell tumors (GCTs) with yolk sac tumor (YST) components after chemotherapy. Notably, patients with VMT in the residual GCT have increased risk of developing sarcomas or hematopoietic malignancies. Here, we report a late-teenage male patient with residual teratoma and high-grade VMT after chemotherapy for a mediastinal mixed GCT, including YST. Whole-exome sequencing revealed biallelic inactivation of TP53 and extensive copy number alterations that suggested whole-genome doubling. The biopsy tissue of the mixed GCT before chemotherapy exhibited overlapping genetic alterations to those in the VMT. Immunohistochemical analyses of the VMT showed that the abnormal vessels were positive for cytokeratin, glypican 3, EZH2, and IMP3. The findings that VMT inherits the genetic alterations of pre-existing mixed GCT and exhibits a partly YST-like immunophenotype might contribute to its clinical aggressiveness.

Indexed as

Endodermal Sinus TumorMediastinal NeoplasmsNeoplasms, Germ Cell and EmbryonalTeratomaTesticular NeoplasmsAdolescentExome SequencingHumansMaleMediastinumAdolescents and young adultsMediastinumTP53Vasculogenic mesenchymal tumorWhole-genome doublingYolk sac tumor

Identifiers

PMID36943470
OpenAlexW4328049601

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.