Evidence map›Paper›PMID 36941433›Full record

ArticleNature structural & molecular biology2023

Loss of H3K9 trimethylation alters chromosome compaction and transcription factor retention during mitosis.

Dounia Djeghloul, Andrew Dimond, Sherry Cheriyamkunnel, Holger Kramer, Bhavik Patel, Karen Brown, Alex Montoya, Chad Whilding, Yi-Fang Wang, Matthias E Futschik and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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  9. Article
  10. Article
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  12. The rebirth of repressive chromatin during early vertebrate development.Annals of the New York Academy of Sciences · 2025
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Overcoming fixation and permeabilization challenges in flow cytometry by optical barcoding and multi-pass acquisition.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2024
    Article
  18. Dinochromosome Heterotermini with Telosomal Anchorages.International journal of molecular sciences · 2024
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Dounia DjeghloulEpigenetic Memory Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK. d.djeghloul@lms.mrc.ac.uk.ORCID 0000-0002-7914-9777
Andrew DimondEpigenetic Memory Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK.ORCID 0000-0002-2996-2479
Sherry CheriyamkunnelEpigenetic Memory Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Holger KramerBiological Mass Spectrometry and Proteomics Facility, MRC London Institute of Medical Sciences, Imperial College London, London, UK.ORCID 0000-0002-6400-0945
Bhavik PatelFlow Cytometry Facility, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Karen BrownEpigenetic Memory Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Alex MontoyaBiological Mass Spectrometry and Proteomics Facility, MRC London Institute of Medical Sciences, Imperial College London, London, UK.ORCID 0000-0002-6501-883X
Chad WhildingMicroscopy Facility, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Yi-Fang WangBioinformatics, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Matthias E FutschikBioinformatics, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Nicolas VelandEpigenetic Memory Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK.ORCID 0000-0002-3096-7867
Thomas MontavonMax-Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Thomas JenuweinMax-Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID 0000-0002-0470-0421
Matthias MerkenschlagerLymphocyte Development Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK.
Amanda G FisherEpigenetic Memory Group, MRC London Institute of Medical Sciences, Imperial College London, London, UK. amanda.fisher@lms.mrc.ac.uk.ORCID 0000-0003-3010-3644
MRC London Institute of Medical Sciences · GBMax Planck Institute of Immunobiology and Epigenetics · DE

Funding

Medical Research Council MC_U120027516Medical Research Council MC_UP_1605/11Medical Research Council MC_UP_1605/12Wellcome TrustWellcome Trust WCMA_PSN102
6 · The paper itself

Abstract

Recent studies have shown that repressive chromatin machinery, including DNA methyltransferases and polycomb repressor complexes, binds to chromosomes throughout mitosis and their depletion results in increased chromosome size. In the present study, we show that enzymes that catalyze H3K9 methylation, such as Suv39h1, Suv39h2, G9a and Glp, are also retained on mitotic chromosomes. Surprisingly, however, mutants lacking histone 3 lysine 9 trimethylation (H3K9me3) have unusually small and compact mitotic chromosomes associated with increased histone H3 phospho Ser10 (H3S10ph) and H3K27me3 levels. Chromosome size and centromere compaction in these mutants were rescued by providing exogenous first protein lysine methyltransferase Suv39h1 or inhibiting Ezh2 activity. Quantitative proteomic comparisons of native mitotic chromosomes isolated from wild-type versus Suv39h1/Suv39h2 double-null mouse embryonic stem cells revealed that H3K9me3 was essential for the efficient retention of bookmarking factors such as Esrrb. These results highlight an unexpected role for repressive heterochromatin domains in preserving transcription factor binding through mitosis and underscore the importance of H3K9me3 for sustaining chromosome architecture and epigenetic memory during cell division.

Indexed as

ProteomicsTranscription FactorsAnimalsDNA MethylationHeterochromatinHistonesMethyltransferasesMiceMitosisPolycomb-Group ProteinsHeterochromatinHistonesMethyltransferasesPolycomb-Group ProteinsTranscription Factors

Identifiers

PMID36941433
PMCPMC10113154
OpenAlexW4328048560

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.