Evidence map›Paper›PMID 36939770›Full record

ArticlePhenomics (Cham, Switzerland)2021

Systematic Genome-Wide Profiles Reveal Alternative Splicing Landscape and Implications of Splicing Regulator DExD-Box Helicase 21 in Aggressive Progression of Adrenocortical Carcinoma.

Wenhao Xu, Aihetaimujiang Anwaier, Wangrui Liu, Xi Tian, Wen-Kai Zhu, Jian Wang, Yuanyuan Qu, Hailiang Zhang, Dingwei Ye

Open access · hybridAbstract read
In one paragraph

Article in Phenomics (Cham, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Wenhao XuDepartment of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.
Aihetaimujiang AnwaierDepartment of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.
Wangrui LiuDepartment of Transplantation, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, 200092 People's Republic of China.
Xi TianDepartment of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.
Wen-Kai ZhuDepartment of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.
Jian WangDepartment of Transplantation, Xinhua Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, 200092 People's Republic of China.
Yuanyuan Qu *Department of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.
Hailiang Zhang *Department of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.
Dingwei Ye *Department of Urology, Fudan University Shanghai Cancer Center, No. 270 Dong'an Road, Shanghai, 200032 People's Republic of China.ORCID 0000-0002-6761-5195
Shanghai Medical College of Fudan University · CNShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alternative splicing (AS) in the tumor biological process has provided a novel perspective on carcinogenesis. However, the clinical significance of individual AS patterns of adrenocortical carcinoma (ACC) has been underestimated, and in-depth investigations are lacking. We selected 76 ACC samples from the Cancer Genome Atlas (TCGA) SpliceSeq and SpliceAid2 databases, and 39 ACC samples from Fudan University Shanghai Cancer Center (FUSCC). Prognosis-related AS events (PASEs) and survival analysis were evaluated based on prediction models constructed by machine-learning algorithm. In total, 23,984 AS events and 3,614 PASEs were detected in the patients with ACC. The predicted risk score of each patient suggested that eight PASEs groups were significantly correlated with the clinical outcomes of these patients ( Supplementary Information: The online version contains supplementary material available at 10.1007/s43657-021-00026-x.

Indexed as

Adrenocortical carcinomaAlternative splicingBioinformaticsDExD-Box Helicase 21 (DDX21)Genome-wide analysisPrognosis

Identifiers

PMID36939770
PMCPMC9590509
OpenAlexW3209394653

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.