Evidence map›Paper›PMID 36939446›Full record

ArticleCCS chemistry2022

Local Conformational Constraint of Firefly Luciferase Can Affect the Energy of Bioluminescence and Enzyme Stability.

Chao Zhang, Xiaoguang Bai, Shengxi Chen, Larisa M Dedkova, Sidney M Hecht

Open access · diamondAbstract read
In one paragraph

Article in CCS chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Biological Regulation StudiedAccounts of chemical research · 2025
    Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chao ZhangBiodesign Center for Bioenergetics, Arizona State University, Tempe, Arizona 85287.
Xiaoguang BaiBiodesign Center for Bioenergetics, Arizona State University, Tempe, Arizona 85287.
Shengxi ChenBiodesign Center for Bioenergetics, Arizona State University, Tempe, Arizona 85287.
Larisa M DedkovaBiodesign Center for Bioenergetics, Arizona State University, Tempe, Arizona 85287.
Sidney M HechtBiodesign Center for Bioenergetics, Arizona State University, Tempe, Arizona 85287.
Arizona State University · US

Funding

Biological Regulation Studied In Vitro and In Cellulo with Modified ProteinsR35GM140819 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI Sidney M. Hecht · 2021 to 2026
$2.9M
Ribosomally Synthesized Proteins Incorporating Modified DipeptidesR01GM121367 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI HECHT, SIDNEY M. · 2017 to 2020
$1.2M
NIGMS NIH HHS R01 GM121367NIGMS NIH HHS R35 GM140819
6 · The paper itself

Abstract

Conformational dynamics contribute importantly to enzyme catalysis, such that targeted conformational constraint may affect catalysis. Firefly luciferases undergo extensive structural change during catalysis; key residues form a hydrophobic pocket, excluding water and enabling maximally energetic light production. Point mutants almost always luminesce at longer wavelengths (lower energy) than the wild type. Conformational constraint, using dipeptide analogue 3 at a position critical for optimized excited state structure, produced luciferase emission at a shorter wavelength by ~10 nm. In comparison, introduction of conformationally constrained analogues 4, 5, or 7 afforded luciferases emitting at longer wavelengths, while a related unconstrained luciferase (analogue 6) exhibited wild-type emission. The constrained luciferases tested were more stable than the wild type. Protein modeling demonstrated that the "inside" or "outside" orientation of the conformationally constrained dipeptide led to the shorter or longer emission wavelength, respectively. More broadly, these results suggest that local conformational constraint can control specific elements of enzyme behavior, both in vitro and in vivo. This represents the first example of studying enzyme function by introducing conformationally constrained dipeptides at a specific protein position. The principles discovered here in luciferase modification will enable studies to control the wavelength emission and photophysical properties of modified luciferases.

Indexed as

conformational constraintgenetic code reprogrammingluciferase bioluminescence and stabilitymodified ribosomesprotein modeling

Identifiers

PMID36939446
PMCPMC10022883
OpenAlexW4212858079

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.