Evidence map›Paper›PMID 36939315›Full record

ArticleAngewandte Chemie (International ed. in English)2023

Decoding the Fucose Migration Product during Mass-Spectrometric analysis of Blood Group Epitopes.

Maike Lettow, Kim Greis, Eike Mucha, Tyler R Lambeth, Murat Yaman, Vasilis Kontodimas, Christian Manz, Waldemar Hoffmann, Gerard Meijer, Ryan R Julian and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

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  13. Conformational Properties of ArylThe Journal of organic chemistry · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Maike LettowFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0003-4063-1977
Kim GreisFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0002-9107-2282
Eike MuchaFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0001-7532-1333
Tyler R LambethDepartment of Chemistry, University of California, Riverside, USA.
Murat YamanDepartment of Chemistry and Biochemistry, Hunter College, The City University of New York, USA.
Vasilis KontodimasDepartment of Chemistry and Biochemistry, Hunter College, The City University of New York, USA.
Christian ManzFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0003-2975-5450
Waldemar HoffmannFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0001-6757-3151
Gerard MeijerFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0001-9669-8340
Ryan R JulianDepartment of Chemistry, University of California, Riverside, USA.ORCID 0000-0003-1580-8355
Gert von HeldenFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.
Mateusz MarianskiDepartment of Chemistry and Biochemistry, Hunter College, The City University of New York, USA.ORCID 0000-0002-6566-9931
Kevin PagelFritz-Haber-Intitut der Max-Planck-Gesellschaft, Germany.ORCID 0000-0001-8054-4718
Fritz Haber Institute of the Max Planck Society · DEThe Graduate Center, CUNY · USUniversity of California, Riverside · USHunter College · US

Funding

Hopping Sugars: molecular mechanism of protonatedglycans rearrangementSC2GM135145 · NIGMS · HUNTER COLLEGE · PI MARIANSKI, MATEUSZ RYSZARD · 2020 to 2022
$468k
NIGMS NIH HHS SC2 GM135145
6 · The paper itself

Abstract

Fucose is a signaling carbohydrate that is attached at the end of glycan processing. It is involved in a range of processes, such as the selectin-dependent leukocyte adhesion or pathogen-receptor interactions. Mass-spectrometric techniques, which are commonly used to determine the structure of glycans, frequently show fucose-containing chimeric fragments that obfuscate the analysis. The rearrangement leading to these fragments-often referred to as fucose migration-has been known for more than 25 years, but the chemical identity of the rearrangement product remains unclear. In this work, we combine ion-mobility spectrometry, radical-directed dissociation mass spectrometry, cryogenic IR spectroscopy of ions, and density-functional theory calculations to deduce the product of the rearrangement in the model trisaccharides Lewis x and blood group H2. The structural search yields the fucose moiety attached to the galactose with an α(1→6) glycosidic bond as the most likely product.

Indexed as

Blood Group AntigensFucoseCarbohydrate SequenceEpitopesMass SpectrometryPolysaccharidesBlood Group AntigensEpitopesFucosePolysaccharidesCarbohydratesDensity Functional CalculationsGas-Phase IonsIR SpectroscopyMass-Spectrometry

Identifiers

PMID36939315
PMCPMC10299593
OpenAlexW4327896697

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.