Evidence map›Paper›PMID 36937047›Full record

ArticleFrontiers in molecular neuroscience2023

Adolescent binge ethanol impacts H3K36me3 regulation of synaptic genes.

Emily R Brocato, Jennifer T Wolstenholme

Open access · goldFull text read
In one paragraph

Article in Frontiers in molecular neuroscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Emily R BrocatoDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, VA, United States.
Jennifer T WolstenholmeDepartment of Pharmacology and Toxicology, Virginia Commonwealth University, Richmond, VA, United States.
Virginia Commonwealth University · US

Funding

Project 5 - Genetic architecture of alcohol use disorder using cross-trait genetic correlations and public next-generation sequencing studiesP50AA022537 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI MICHAEL F MILES · 2014 to 2026
$19.6M
Histone methylation as a potential mechanism for myelin deficits and behavioral alterations following adolescent binge ethanolR01AA026347 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI WOLSTENHOLME, JENNIFER T · 2018 to 2022
$1.7M
Adolescent Binge Ethanol Dysregulation of H3K36me3 Leads to Cryptic Transcription and Lasting Memory DeficitsF31AA029259 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI BROCATO, EMILY ROSE · 2021 to 2022
$74k
NIAAA NIH HHS F31 AA029259NIAAA NIH HHS P50 AA022537NIAAA NIH HHS R01 AA026347
6 · The paper itself

Abstract

Adolescence is marked in part by the ongoing development of the prefrontal cortex (PFC). Binge ethanol use during this critical stage in neurodevelopment induces significant structural changes to the PFC, as well as cognitive and behavioral deficits that can last into adulthood. Previous studies showed that adolescent binge ethanol causes lasting deficits in working memory, decreases in the expression of chromatin remodeling genes responsible for the methylation of histone 3 lysine 36 (H3K36), and global decreases in H3K36 in the PFC. H3K36me3 is present within the coding region of actively-transcribed genes, and safeguards against aberrant, cryptic transcription by RNA Polymerase II. We hypothesize that altered methylation of H3K36 could play a role in adolescent binge ethanol-induced memory deficits. To investigate this at the molecular level, ethanol (4 g/kg, i.g.) or water was administered intermittently to adolescent mice. RNA-and ChIP-sequencing were then performed within the same tissue to determine gene expression changes and identify genes and loci where H3K36me3 was disrupted by ethanol. We further assessed ethanol-induced changes at the transcription level with differential exon-use and cryptic transcription analysis - a hallmark of decreased H3K36me3. Here, we found ethanol-induced changes to the gene expression and H3K36me3-regulation of synaptic-related genes in all our analyses. Notably, H3K36me3 was differentially trimethylated between ethanol and control conditions at synaptic-related genes, and

Indexed as

adolescent ethanolalcoholChIP-seqcryptic transcriptionepigeneticsH3K36me3PFCRNA-seq

Identifiers

PMID36937047
PMCPMC10020663
OpenAlexW4323044532

What OpenQuestion holds

Textfull text, public
LicenceCC BY
reference markers read3
measurements read31
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.