Evidence map›Paper›PMID 36935742›Full record

ArticleFrontiers in physiology2023

Cutting corners: The impact of storage and DNA extraction on quality and quantity of DNA in honeybee (

Ajda Moškrič, Anja Pavlin, Katarina Mole, Andraž Marinč, Jernej Bubnič, Andreja Opara, Marin Kovačić, Zlatko Puškadija, Aleksandar Uzunov, Sreten Andonov and 2 more

Open access · goldFull text read
In one paragraph

Article in Frontiers in physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 5 countries.

Ajda MoškričDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Anja PavlinDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Katarina MoleDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Andraž MarinčDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Jernej BubničDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Andreja OparaDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Marin KovačićFaculty of Agrobiotechnical Sciences Osijek, University of J.J. Strossmayer, Osijek, Croatia.
Zlatko PuškadijaFaculty of Agrobiotechnical Sciences Osijek, University of J.J. Strossmayer, Osijek, Croatia.
Aleksandar UzunovFaculty of Agricultural Sciences and Food, Ss. Cyril and Methodius University in Skopje, Skopje, Macedonia.
Sreten AndonovDepartment of Animal Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Bjørn DahleNorwegian Beekeepers Association, Kløfta, Norway.
Janez PrešernDepartment of Animal Production, Agricultural Institute of Slovenia, Ljubljana, Slovenia.
Agricultural institute of Slovenia · SIUniversity of Osijek · HRNorwegian Beekeepers Association · NOSaints Cyril and Methodius University of Skopje · MKSwedish University of Agricultural Sciences · SEUniversity of Ljubljana · SI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The purpose of our study was to investigate methods of short-term storage that allow preservation, transport and retrieval of genetic information contained in honeybee queen's spermatheca. Genotyping of the honeybee colony requires well ahead planned sample collection, depending on the type of data to be acquired. Sampling and genotyping of spermatheca's content instead of individual offspring is timesaving, allowing answers to the questions related to patriline composition immediately after mating. Such procedure is also cheaper and less error prone. For preservation either Allprotect Tissue Reagent (Qiagen) or absolute ethanol were used. Conditions during transportation were simulated by keeping samples 6-8 days at room temperature. Six different storing conditions of spermathecas were tested, complemented with two DNA extraction methods. We have analysed the concentration of DNA, RNA, and proteins in DNA extracts. We also analysed how strongly the DNA is subjected to fragmentation (through amplification of genetic markers ANT2 and tRNA

Indexed as

Apis melliferabreedingDNA extractionhoneybeemicrosatellitepatrilinepreservation methodspermatheca

Identifiers

PMID36935742
PMCPMC10020693
OpenAlexW4323045667

What OpenQuestion holds

Textfull text, public
LicenceCC BY
reference markers read3
measurements read41
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.