Evidence map›Paper›PMID 36934255›Full record

ArticleActa neuropathologica communications2023

The localization of molecularly distinct microglia populations to Alzheimer's disease pathologies using QUIVER.

Ryan K Shahidehpour, Abraham S Nelson, Lydia G Sanders, Chloe R Embry, Peter T Nelson, Adam D Bachstetter

Open access · goldFull text read
In one paragraph

Article in Acta neuropathologica communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. A pathologic study of Perivascular pTDP-43 Lin bodies in LATE-NC.Acta neuropathologica communications · 2024
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ryan K ShahidehpourSpinal Cord and Brain Injury Research Center, University of Kentucky, 741 S. Limestone St., Lexington, KY, 40536, USA.
Abraham S NelsonSpinal Cord and Brain Injury Research Center, University of Kentucky, 741 S. Limestone St., Lexington, KY, 40536, USA.
Lydia G SandersSpinal Cord and Brain Injury Research Center, University of Kentucky, 741 S. Limestone St., Lexington, KY, 40536, USA.
Chloe R EmbrySpinal Cord and Brain Injury Research Center, University of Kentucky, 741 S. Limestone St., Lexington, KY, 40536, USA.
Peter T NelsonDepartment of Neuroscience, University of Kentucky, Lexington, KY, 40536, USA.
Adam D BachstetterSpinal Cord and Brain Injury Research Center, University of Kentucky, 741 S. Limestone St., Lexington, KY, 40536, USA. adam.bachstetter@uky.edu.ORCID 0000-0003-4646-6757
University of Kentucky · US

Funding

University of Kentucky Alzheimer's Disease Research CenterP30AG072946 · NIA · UNIVERSITY OF KENTUCKY · PI LINDA J VAN ELDIK · 2021 to 2026
$23.5M
University of Kentucky Alzheimer's Disease Core Center - Biomarker CoreP30AG028383 · NIA · UNIVERSITY OF KENTUCKY · PI GOLD, BRIAN TIMOTHY, VAN ELDIK, LINDA J · 2006 to 2020
$23.3M
Sleep Fragmentation and Alzheimer’s DiseaseR01AG068215 · NIA · UNIVERSITY OF KENTUCKY · PI BACHSTETTER, ADAM D, DUNCAN, MARILYN J. · 2020 to 2024
$3.8M
Training in Translational Research in Alzheimer's and Related Dementias (TRIAD)T32AG078110 · NIA · UNIVERSITY OF KENTUCKY · PI Michael Paul Murphy, LINDA J VAN ELDIK · 2022 to 2026
$2.3M
Training in Translational Research in Alzheimer's and Related Dementias (TRIAD)T32AG057461 · NIA · UNIVERSITY OF KENTUCKY · PI MURPHY, MICHAEL PAUL, VAN ELDIK, LINDA J · 2017 to 2021
$2.1M
Regulation of Microglial Activation State by a Lipid TransporterR01AG064234 · NIA · UNIVERSITY OF KENTUCKY · PI BIEBERICH, ERHARD · 2020 to 2024
$1.9M
Cell-Specific Actions of IL-1 / IL-1R1 Signaling Following Traumatic Brain InjuryR01NS103785 · NINDS · UNIVERSITY OF KENTUCKY · PI BACHSTETTER, ADAM D · 2019 to 2023
$1.6M
Translational Approaches to Mitigate Enhanced Alzheimer’s Disease Risk Following a Mild TBIRF1NS119165 · NINDS · UNIVERSITY OF KENTUCKY · PI BACHSTETTER, ADAM D · 2021 to 2021
$1.1M
Pumping iron: Loss of iron homeostasis causes microglia degeneration in ADR21AG066865 · NIA · UNIVERSITY OF KENTUCKY · PI BACHSTETTER, ADAM D · 2020 to 2020
$421k
NIA NIH HHS P30 AG028383NIA NIH HHS P30 AG072946NIA NIH HHS R01 AG064234NIA NIH HHS R01AG064234NIA NIH HHS R01 AG068215NIA NIH HHS R01AG068215NIA NIH HHS R21 AG066865NIA NIH HHS R21AG066865NIA NIH HHS T32 AG057461NIA NIH HHS T32 AG078110NINDS NIH HHS R01 NS103785NINDS NIH HHS R01NS103785NINDS NIH HHS RF1 NS119165NINDS NIH HHS RF1NS119165
6 · The paper itself

Abstract

New histological techniques are needed to examine protein distribution in human tissues, which can reveal cell shape and disease pathology connections. Spatial proteomics has changed the study of tumor microenvironments by identifying spatial relationships of immunomodulatory cells and proteins and contributing to the discovery of new cancer immunotherapy biomarkers. However, the fast-expanding toolkit of spatial proteomic approaches has yet to be systematically applied to investigate pathological alterations in the aging human brain in health and disease states. Moreover, post-mortem human brain tissue presents distinct technical problems due to fixation procedures and autofluorescence, which limit fluorescence methodologies. This study sought to develop a multiplex immunohistochemistry approach (visualizing the immunostain with brightfield microscopy). Quantitative multiplex Immunohistochemistry with Visual colorimetric staining to Enhance Regional protein localization (QUIVER) was developed to address these technical challenges. Using QUIVER, a ten-channel pseudo-fluorescent image was generated using chromogen removal and digital microscopy to identify unique molecular microglia phenotypes. Next, the study asked if the tissue environment, specifically the amyloid plaques and neurofibrillary tangles characteristic of Alzheimer's disease, has any bearing on microglia's cellular and molecular phenotypes. QUIVER allowed the visualization of five molecular microglia/macrophage phenotypes using digital pathology tools. The recognizable reactive and homeostatic microglia/macrophage phenotypes demonstrated spatial polarization towards and away from amyloid plaques, respectively. Yet, microglia morphology appearance did not always correspond to molecular phenotype. This research not only sheds light on the biology of microglia but also offers QUIVER, a new tool for examining pathological alterations in the brains of the elderly.

Indexed as

Alzheimer DiseaseAgedAmyloid beta-PeptidesBrainHumansMicrogliaNeurofibrillary TanglesPlaque, AmyloidProteomicsTremorAmyloid beta-PeptidesDigital pathologyGliaHistologyMultiplexed tissue imagingNeurodegenerative diseaseNeuropathologySingle-cell analysis

Identifiers

PMID36934255
PMCPMC10024857
OpenAlexW4327814877

What OpenQuestion holds

Textfull text, public
LicenceCC BY
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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.