Evidence map›Paper›PMID 36933185›Full record

ArticleJournal of animal science2023

Convergent changes in melanocortin receptor 1 gene are associated with black-headed coat color in sheep.

Qian Zhou, Chunna Cao, Huanhuan Zhang, Yilin Liang, Xinyue Zhang, Yuxin Kang, Wenwen Fang, Xianyong Lan, Ran Li, Chuanying Pan

Open access · hybridAbstract read
In one paragraph

Article in Journal of animal science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Qian ZhouCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Chunna CaoCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Huanhuan ZhangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Yilin LiangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Xinyue ZhangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Yuxin KangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Wenwen FangCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Xianyong LanCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Ran LiCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Chuanying PanCollege of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi 712100, China.
Northwest A&F University · CN

Funding

National Key R&D Program of China 2022YFF1000100 & 2022YFD1300200Shaanxi Livestock and Poultry Breeding Double-chain Fusion Key Project 2022GD-TSLD-46-0401
6 · The paper itself

Abstract

As one of the most obvious phenotypic traits, the coat color of sheep is an ideal model to study the genetic mechanisms underlying coat color varieties of mammals. One distinguishable coat color is the black-headed type, such as the famous black-headed Dorper sheep from Africa and Bayinbuluke sheep from Asia. In this study, we compared the genome sequences of black-headed and all-white sheep to identify causative genes for the black-headed sheep, including black-headed Dorper vs. white-headed Dorper, as well as Bayinbuluke (black-headed) vs. Small-tailed Han (all-white). The most differentiating region between black-headed sheep and all-white sheep was found to harbor a haplotype covering melanocortin receptor 1 (MC1R) gene. The share of this haplotype by the black-headed sheep from Africa and Asia suggested that the convergent change in the MC1R region is likely to determine this unique coat color. Two missense mutations (g. 14251947T > A and g. 14252090G > A) within this haplotype of MC1R gene were found. We further analyzed whole genome sequence data of 460 worldwide sheep with diverse coat colors and confirmed the association between the MC1R haplotype with pigmentation variations. Our study provides novel insights into coat color genetics in sheep and expands our knowledge of the link between MC1R gene and varying pigmentation patterns in sheep.

Indexed as

Hair ColorReceptor, Melanocortin, Type 1AllelesAnimalsAsiaHaplotypesMammalsPhenotypeSheepReceptor, Melanocortin, Type 1black-headed sheepcoat colormelanocortin receptor 1missense mutationssheep

Identifiers

PMID36933185
PMCPMC10100648
OpenAlexW4327811395

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.