Evidence map›Paper›PMID 36932251›Full record

ArticleJournal of digital imaging2023

Effect of Dataset Size and Medical Image Modality on Convolutional Neural Network Model Performance for Automated Segmentation: A CT and MR Renal Tumor Imaging Study.

Harrison C Gottlich, Adriana V Gregory, Vidit Sharma, Abhinav Khanna, Amr U Moustafa, Christine M Lohse, Theodora A Potretzke, Panagiotis Korfiatis, Aaron M Potretzke, Aleksandar Denic and 5 more

Abstract read
In one paragraph

Article in Journal of digital imaging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Harrison C GottlichMayo Clinic Alix School of Medicine, Mayo Clinic, Rochester, MN, USA.
Adriana V GregoryDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN, USA.
Vidit SharmaDepartment of Urology, Mayo Clinic, Rochester, MN, USA.
Abhinav KhannaDepartment of Urology, Mayo Clinic, Rochester, MN, USA.
Amr U MoustafaDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN, USA.
Christine M LohseDivision of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA.
Theodora A PotretzkeDepartment of Radiology, Mayo Clinic, Rochester, MN, USA.
Panagiotis KorfiatisDepartment of Radiology, Mayo Clinic, Rochester, MN, USA.
Aaron M PotretzkeDepartment of Urology, Mayo Clinic, Rochester, MN, USA.
Aleksandar DenicDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN, USA.
Andrew D RuleDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, MN, USA.
Naoki TakahashiDepartment of Radiology, Mayo Clinic, Rochester, MN, USA.
Bradley J EricksonDepartment of Radiology, Mayo Clinic, Rochester, MN, USA.
Bradley C LeibovichDepartment of Urology, Mayo Clinic, Rochester, MN, USA.
Timothy L KlineDepartment of Radiology, Mayo Clinic, Rochester, MN, USA. Kline.Timothy@mayo.edu.ORCID 0000-0002-7917-9853

Funding

Advanced MR Imaging and Image Analytics as a Precision Medicine Tool to Manage ADPKDK01DK110136 · NIDDK · MAYO CLINIC ROCHESTER · PI KLINE, TIMOTHY LEE · 2017 to 2021
$732k
Artificial Intelligence-Based Approaches for Renal Structure Characterization in Computed Tomography ImagesR03DK125632 · NIDDK · MAYO CLINIC ROCHESTER · PI KLINE, TIMOTHY LEE · 2020 to 2021
$233k
NIDDK NIH HHS K01 DK110136NIDDK NIH HHS R03 DK125632
6 · The paper itself

Abstract

The aim of this study is to investigate the use of an exponential-plateau model to determine the required training dataset size that yields the maximum medical image segmentation performance. CT and MR images of patients with renal tumors acquired between 1997 and 2017 were retrospectively collected from our nephrectomy registry. Modality-based datasets of 50, 100, 150, 200, 250, and 300 images were assembled to train models with an 80-20 training-validation split evaluated against 50 randomly held out test set images. A third experiment using the KiTS21 dataset was also used to explore the effects of different model architectures. Exponential-plateau models were used to establish the relationship of dataset size to model generalizability performance. For segmenting non-neoplastic kidney regions on CT and MR imaging, our model yielded test Dice score plateaus of [Formula: see text] and [Formula: see text] with the number of training-validation images needed to reach the plateaus of 54 and 122, respectively. For segmenting CT and MR tumor regions, we modeled a test Dice score plateau of [Formula: see text] and [Formula: see text], with 125 and 389 training-validation images needed to reach the plateaus. For the KiTS21 dataset, the best Dice score plateaus for nn-UNet 2D and 3D architectures were [Formula: see text] and [Formula: see text] with number to reach performance plateau of 177 and 440. Our research validates that differing imaging modalities, target structures, and model architectures all affect the amount of training images required to reach a performance plateau. The modeling approach we developed will help future researchers determine for their experiments when additional training-validation images will likely not further improve model performance.

Indexed as

Image Processing, Computer-AssistedKidney NeoplasmsHumansMagnetic Resonance ImagingNeural Networks, ComputerRetrospective StudiesTomography, X-Ray ComputedDeep learningKidneyMachine learning model performanceNephrectomySemantic segmentationSimilarity metrics

Identifiers

PMID36932251
PMCPMC10406754

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.