Evidence map›Paper›PMID 36932058›Full record

ArticleNature communications2023

The architecture of transmembrane and cytoplasmic juxtamembrane regions of Toll-like receptors.

F D Kornilov, A V Shabalkina, Cong Lin, P E Volynsky, E F Kot, A L Kayushin, V A Lushpa, M V Goncharuk, A S Arseniev, S A Goncharuk and 2 more

Open access · goldFull text read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

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  17. Frontiers in cellular and infection microbiology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

F D Kornilov *Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.
A V Shabalkina *Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.ORCID 0000-0003-3752-5612
Cong Lin *Laboratory of Chemical Biology, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, 130022, Changchun, Jilin, China.
P E VolynskyShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.
E F KotShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.ORCID 0000-0003-4163-8273
A L KayushinShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.
V A LushpaShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.ORCID 0000-0002-1788-1153
M V GoncharukShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.
A S ArsenievShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia.
S A GoncharukShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia. ms.goncharuk@gmail.com.ORCID 0000-0002-0263-6462
Xiaohui WangLaboratory of Chemical Biology, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, 130022, Changchun, Jilin, China. xiaohui.wang@ciac.ac.cn.ORCID 0000-0002-3415-5612
K S MineevShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow, 117997, Russia. mineev@nmr.ru.ORCID 0000-0002-2418-9421
Moscow Institute of Physics and Technology · RUInstitute of Bioorganic Chemistry · RUChinese Academy of Sciences · CNInstitute of Cytology · RUUniversity of Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toll-like receptors (TLRs) are the important participants of the innate immune response. Their spatial organization is well studied for the ligand-binding domains, while a lot of questions remain unanswered for the membrane and cytoplasmic regions of the proteins. Here we use solution NMR spectroscopy and computer simulations to investigate the spatial structures of transmembrane and cytoplasmic juxtamembrane regions of TLR2, TLR3, TLR5, and TLR9. According to our data, all the proteins reveal the presence of a previously unreported structural element, the cytoplasmic hydrophobic juxtamembrane α-helix. As indicated by the functional tests in living cells and bioinformatic analysis, this helix is important for receptor activation and plays a role, more complicated than a linker, connecting the transmembrane and cytoplasmic parts of the proteins.

Indexed as

Toll-Like ReceptorsCell MembraneCytoplasmHumansImmunity, InnateToll-Like Receptor 5Toll-Like Receptor 9Toll-Like Receptor 5Toll-Like Receptor 9Toll-Like Receptors

Identifiers

PMID36932058
PMCPMC10023784
OpenAlexW4327699013

What OpenQuestion holds

Textfull text, public
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.