Evidence map›Paper›PMID 36929689›Full record

ArticleMicrobial biotechnology2023

A MAD7-based genome editing system for Escherichia coli.

Markus Mund, Wadim Weber, Daniel Degreif, Christoph Schiklenk

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Markus MundSanofi-Aventis Deutschland GmbH, Global CMC Microbial Platform, USP Development - Molecular Biology, Frankfurt am Main, Germany.ORCID 0000-0001-6449-743X
Wadim WeberSanofi-Aventis Deutschland GmbH, Global CMC Microbial Platform, USP Development - Molecular Biology, Frankfurt am Main, Germany.ORCID 0000-0002-6368-5751
Daniel DegreifSanofi-Aventis Deutschland GmbH, Global CMC Microbial Platform, USP Development - Molecular Biology, Frankfurt am Main, Germany.ORCID 0000-0002-5475-6917
Christoph SchiklenkSanofi-Aventis Deutschland GmbH, Global CMC Microbial Platform, USP Development - Molecular Biology, Frankfurt am Main, Germany.ORCID 0000-0002-6846-6224
Sanofi (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A broad variety of biomolecules is industrially produced in bacteria and yeasts. These microbial expression hosts can be optimized through genetic engineering using CRISPR tools. Here, we designed and characterized such a modular genome editing system based on the Cas12a-like RNA-guided nuclease MAD7 in Escherichia coli. This system enables the efficient generation of single nucleotide polymorphisms (SNPs) or gene deletions and can directly be used with donor DNA from benchtop DNA assembly to increase throughput. We combined multiple edits to engineer an E. coli strain with reduced overflow metabolism and increased plasmid yield, highlighting the versatility and industrial applicability of this approach.

Indexed as

CRISPR-Cas SystemsGene EditingEscherichia coliGenetic EngineeringPlasmids

Identifiers

PMID36929689
PMCPMC10128132
OpenAlexW4327677489

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.