Evidence map›Paper›PMID 36929574›Full record

ArticleEMBO reports2023

The P4-ATPase Drs2 interacts with and stabilizes the multisubunit tethering complex TRAPPIII in yeast.

Irene Pazos, Marta Puig-Tintó, Laura Betancur, Jorge Cordero, Nereida Jiménez-Menéndez, Marc Abella, Altair C Hernández, Ana G Duran, Emi Adachi-Fernández, Carla Belmonte-Mateos and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 3 countries.

Irene PazosDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.ORCID 0000-0003-4677-5357
Marta Puig-TintóDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Laura BetancurDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Jorge CorderoDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.ORCID 0000-0003-4671-0123
Nereida Jiménez-MenéndezDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Marc AbellaDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Altair C HernándezDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Ana G DuranDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Emi Adachi-FernándezDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Carla Belmonte-MateosDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Susana Sabido-BozoDepartment of Cell Biology, University of Seville, Seville, Spain.ORCID 0000-0002-5753-2505
Sébastien TosiInstitute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Akiko NezuDepartment of Genetics, Graduate School of Medicine, Osaka University, Osaka, Japan.ORCID 0000-0002-6902-6749
Baldomero OlivaDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.
Julien ColombelliInstitute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Todd R GrahamDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
Tamotsu YoshimoriDepartment of Genetics, Graduate School of Medicine, Osaka University, Osaka, Japan.ORCID 0000-0002-7041-890X
Manuel MuñizDepartment of Cell Biology, University of Seville, Seville, Spain.ORCID 0000-0001-8011-6991
Maho HamasakiDepartment of Genetics, Graduate School of Medicine, Osaka University, Osaka, Japan.
Oriol GallegoDepartment of Medicine and Life Sciences (MELIS), Pompeu Fabra University (UPF), Barcelona, Spain.ORCID 0000-0001-7479-2563
Universitat Pompeu Fabra · ESUbe Frontier University · JPInstitute for Research in Biomedicine · ESInstituto de Biomedicina de Sevilla · ESVanderbilt University · US

Funding

Mechanisms of membrane homeostasis through protein and lipid transportR35GM144123 · NIGMS · VANDERBILT UNIVERSITY · PI TODD R GRAHAM · 2022 to 2026
$2.4M
NIGMS NIH HHS R35 GM144123
6 · The paper itself

Abstract

Multisubunit Tethering Complexes (MTCs) are a set of conserved protein complexes that tether vesicles at the acceptor membrane. Interactions with other components of the trafficking machinery regulate MTCs through mechanisms that are partially understood. Here, we systematically investigate the interactome that regulates MTCs. We report that P4-ATPases, a family of lipid flippases, interact with MTCs that participate in the anterograde and retrograde transport at the Golgi, such as TRAPPIII. We use the P4-ATPase Drs2 as a paradigm to investigate the mechanism and biological relevance of this interplay during transport of Atg9 vesicles. Binding of Trs85, the sole-specific subunit of TRAPPIII, to the N-terminal tail of Drs2 stabilizes TRAPPIII on membranes loaded with Atg9 and is required for Atg9 delivery during selective autophagy, a role that is independent of P4-ATPase canonical functions. This mechanism requires a conserved I(S/R)TTK motif that also mediates the interaction of the P4-ATPases Dnf1 and Dnf2 with MTCs, suggesting a broader role of P4-ATPases in MTC regulation.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesATP-Binding Cassette TransportersAutophagy-Related ProteinsCalcium-Transporting ATPasesMembrane ProteinsAdenosine TriphosphatasesATG9 protein, S cerevisiaeATP-Binding Cassette TransportersAutophagy-Related ProteinsCalcium-Transporting ATPasesDnf2 protein, S cerevisiaeDRS2 protein, S cerevisiaeMembrane ProteinsSaccharomyces cerevisiae ProteinsAtg9Cvt pathwayDrs2TRAPPIIIvesicle transport

Identifiers

PMID36929574
PMCPMC10157312
OpenAlexW4327547442

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.